Gene PICST_89939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_89939 
Symbol 
ID4839528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1410613 
End bp1412103 
Gene Length1491 bp 
Protein Length368 aa 
Translation table12 
GC content43% 
IMG OID640390843 
Productconserved hypothetical protein 
Protein accessionXP_001384960 
Protein GI150865650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTTTAGCCA CATTCACCAA AGTTCGAGCA AGGGCCGCTA TTCTGCCTGT GGCCCTCTTA 
GTTGATTTGT AGAGAAAACA AGCTTCCACT TTTGAATTCT ACAGAATCCT CATTAATATA
GAAAATACAC ATAGTCCTGA AACCTACTAG TTTCTGAAAT TTGATTTTGA TTGCGATTCA
GTGAACTTCC TCGTTTCCAC CAGTTTCTTT ACTTTTCCAC TTTTTTATCA CATACCTTGA
TCTTCCATAT GTCCGCACTC GACGAAAAGT ATATTGGACT CGGTTTGGCG ATGTCATCGT
CGTTGGCGAT CGGTACTTCT TTCATTATCA CCAAGAAAGG GTTGATTGCA GCAGCAGCCA
GGTCAGGTGC TTCGCAGGTC CAAGCTTCCG AATATCTACA GAACCCAGTG TGGTGGGCCG
GTATGATTAC TATGGCCATA GGAGAAATTG CCAACTTTGC TGCCTACACT TTTGCACCTG
CCATCTTGGT GACTCCATTA GGTGCATTAT CTGTGATTAT CGGTGCTGTG TTAGCAGCGA
TCTTTTTGAA GGAGGAGTTG GGCACGCTTG GCAAAATGGG CTGTGCCATC TGTTTGATGG
GATCGGTGAT TATCATTCTC CATGCTCCTC CCGACAAGGA GATTCTGACT GTTGACGAGA
TCTTGGGCTA TGCAACTAAG CCAGGATTTT TATTCTACTG CTTCTTGGTT AGTGTATATT
CGCTCTTCAT GATCTACAAA ATTGTGCCTA AGTACGGGCA CACCAACCCC ATGATCTATC
TCTCTATCTG CTCCTCTGTG GGCTCCATCT CGGTGATGTC CATCAAAGCA TTTGGAATAG
CTCTTAAGTT GACTTTGGGA GGAAATAACC AGTTCACCCA TTTGTCCACT TACTTGTTTT
TGTTTGTGGT CGCCTTGTGT ATTTTGACGC AAATGAACTA CTTCAACAAG GCTTTGGACC
AATTCGATAC CTCTATCGTG AATCCATTGT ACTACGTGAC TTTCACAACA TTTACCCTCA
CGGCTTCGTT CATTTTGTTC AGAGGTTTCA ATACCACGTC TGCAGTAAAC ATCATCTCGT
TATTGATTGG ATTCTTGATC ATTTTTAGCG GAGTGTATTT GTTGAACATT TCAAGGAAGG
ACAACGAAGG TAGATCAAGA GAGTTGTTTG GTGTTCACAA CGATAAGGAC ATGGCACCAA
TGGAAAACGG AGTTGCCAGT CTTTCCATGA GAAGATCGAT GCAGATTAGC AGATCAGACT
ACAACGATGA AGAAACTGTG GGACTCAGAA GATTCGACAG CTTTGAACTC GGCAGCGATG
ATGAAGAAGA CACCCGCAGC CACCAGAGAC ACTAGATAGC ATCTTCTACT TTATGTTGTT
AGATTTGACA TGTACACTAG ACGCAATATA CGGGTAAAAT AAATATAGGC TGCAATTGCC
GTAACAAAGG AGCTATAGCA CATGTAACTA CTTTAATATA CTGTAACAAC T
 
Protein sequence
MSALDEKYIG LGLAMSSSLA IGTSFIITKK GLIAAAARSG ASQVQASEYL QNPVWWAGMI 
TMAIGEIANF AAYTFAPAIL VTPLGALSVI IGAVLAAIFL KEELGTLGKM GCAICLMGSV
IIILHAPPDK EISTVDEILG YATKPGFLFY CFLVSVYSLF MIYKIVPKYG HTNPMIYLSI
CSSVGSISVM SIKAFGIALK LTLGGNNQFT HLSTYLFLFV VALCILTQMN YFNKALDQFD
TSIVNPLYYV TFTTFTLTAS FILFRGFNTT SAVNIISLLI GFLIIFSGVY LLNISRKDNE
GRSRELFGVH NDKDMAPMEN GVASLSMRRS MQISRSDYND EETVGLRRFD SFELGSDDEE
DTRSHQRH