Gene PICST_89472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_89472 
Symbol 
ID4839309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1698698 
End bp1699176 
Gene Length479 bp 
Protein Length132 aa 
Translation table12 
GC content42% 
IMG OID640390624 
Productpredicted protein 
Protein accessionXP_001385329 
Protein GI126137611 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0093] Ribosomal protein L14 
TIGRFAM ID[TIGR01067] ribosomal protein L14, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAACAATGAT CTACTTGAAA TCGCTTTTGA ACGTCATCGA CAACTCCGGA GCCCAAGTTG 
TGGAATGTAT TAAAGTGTTG CGTCACGGGC CATTGAATTT TGCCAAGGTC GGAGATGAAA
TAACAGTAGT AGTCAAGAAG GCCAGACCCT TACAAGCAGA AATCACCGGC CAATCAGCCA
ACAACAGAGT GAAAAGAAGA GATATTTGTC GTGCCATAGT GGTAAGAACC AAAGCTCCAT
TCAGAAGACC CGACGGTTCT GTAGTCAGAT TTGATGATAA TGCATGTGTC TTGGTCAACA
AGAGTGGTGA GCCTTTGGGA ACAAGAATCT CGTCTGTTGT AGCCAAGGAG TTAAGAGACT
TGCAGTACAA CAAGATCGTG TCGTTGGCTC CAAAGACGTT TTAGAGACTT GGATATGATA
GCCCCACTAC GAACTTCATT TCTTGTATAT ACATTTTAAT ATATGAAACA TTAATGTCA
 
Protein sequence
MIYLKSLLNV IDNSGAQVVE CIKVLRHGPL NFAKVGDEIT VVVKKARPLQ AEITGQSANN 
RVKRRDICRA IVVRTKAPFR RPDGSVVRFD DNACVLVNKS GEPLGTRISS VVAKELRDLQ
YNKIVSLAPK TF