Gene PICST_84188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_84188 
SymbolCST20 
ID4839221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp779343 
End bp780550 
Gene Length1208 bp 
Protein Length353 aa 
Translation table12 
GC content40% 
IMG OID640390536 
Productserine/threonine kinase 
Protein accessionXP_001384812 
Protein GI126136577 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAGC AGCAGCAACA GCAACAACAG GCTCCTAAGG CACCCGCAGC TTCTCCAGAA 
GCGCAGAGAA AGAAGCCTAA CCAACAGCCT GTAAGAGACG CTAAGCAAGC AGCTATTCTA
GCTCAAAAGA AGCGTGAAGA GAAGAAACGC AAGAACCAGC AGATTATCGC CAAATTGCAG
TCCATTTGTA GTGAAGGTGA TCCAAATGAA AAGTATAAGG ATTTGACGAA GATTGGACAA
GGTGCTTCTG GAGGCGTTTT CATTGCTCAT GAAATTGGAA GCAATTCCAA GACTGTTGCT
ATAAAGCAGA TGAATTTGGA GCAGCAACCC AAAAAAGAAT TGATCATCAA CGAAATCTTG
GTCATGAAGG GTAGCAAACA TCCCAACATT GTGAACTTCA TAGACTCATA TCTCTTAAAG
GGAGACTTAT GGGTCGTTAT GGAGTACATG GAAGGGGGTT CTTTGACAGA GATTGTCACA
CATAGTGTCA TGACCGAAGG CCAGATTGGT GCTGTATGTC GTGAAACGTT GAAGGGGTTG
AAATTTTTAC ACTCCAAGGG TGTTATTCAC CGTGATATTA AGTCTGATAA TATTTTGTTA
AATATCGATG GTAATATCAA AATGACTGAC TTCGGTTTCT GTGCTCAAAT CAACGAGCTT
AATCTCAAGA GAACTACAAT GGTGGGAACT CCCTACTGGA TGGCTCCAGA AGTTGTTTCC
AGAAAGGAGT ACGGACCAAA GGTTGATATT TGGTCTTTGG GTATCATGGT GATTGAGATG
ATTGAAGGTG AACCTCCATA CTTGAACGAG ACACCTTTGA GAGCTCTCTA TTTAATTGCA
ACTAACGGTA CGCCTAAGTT GAAGGAGCCT GAGGCTTTGA GTTACGATAT AAGAAAGTTC
TTGTCGTGGT GTTTGCAAGT TGATTTTAAC AAGCGTGCCA ATGCAGATGA ATTATTGAAC
GACAAGTTCA TCCTAGAAAG TGACGACGTC TCATCTTTGA GTCCTTTGGT CAAGATAGCC
AGGATGAAAA AAGCCAACGA AAGCGATGAT ATGAGTGCTT GACTTGTTGT CCAATTGATT
GAGTTTATAG TCACGATTGC ATTTAAAGAG ACTTATATGC TCTATATTTT TGTAAACATA
TCAACTCTAA TTCTATCCTA ATTGTATAAA TAAAAACTTG GAGCAACAAC GTTAAATTAT
AATAACTT
 
Protein sequence
MKEQQQQQQQ APKAPAASPE AQRKKPNQQP VRDAKQAAIL AQKKREEKKR KNQQIIAKLQ 
SICSEGDPNE KYKDLTKIGQ GASGGVFIAH EIGSNSKTVA IKQMNLEQQP KKELIINEIL
VMKGSKHPNI VNFIDSYLLK GDLWVVMEYM EGGSLTEIVT HSVMTEGQIG AVCRETLKGL
KFLHSKGVIH RDIKSDNILL NIDGNIKMTD FGFCAQINEL NLKRTTMVGT PYWMAPEVVS
RKEYGPKVDI WSLGIMVIEM IEGEPPYLNE TPLRALYLIA TNGTPKLKEP EALSYDIRKF
LSWCLQVDFN KRANADELLN DKFILESDDV SSLSPLVKIA RMKKANESDD MSA