| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83723 |
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| Symbol | |
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| ID | 4839230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 814833 |
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| End bp | 816902 |
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| Gene Length | 2070 bp |
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| Protein Length | 557 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390545 |
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| Product | predicted protein |
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| Protein accession | XP_001384821 |
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| Protein GI | 150865554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000478126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.12365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGACCCTATA AATTGCCATT GGAAATATTT GTCTAGTCTA ATATTTGTAT ATTTAGGTGA
TTTCAACCTC TTTAAGCCGC CTTAGTACAG CCTATTTTCA CAAATAGTAG CACTGAAGAT
TTATTAAACT ACGAAGTATT CACTTTCTGT TTTCACTACG ATTTTCATTC GGCAATACTT
AATCCGCATA TTCCTACGAA GTTTGCCAAT TTAACCAAGC ACCTTCATTC TAATTGTGGA
GACTACTTCA GTTGCTAGTC TTATCTAAGG AACGACTATA GACTACTGTG AAATTTCTAT
ATATTCAACC CAGGGCAAAC CCACTAGACC AAACACGCAT AATGAAGTCA TGTCGTACAT
AGTAAAGAAA ATATTCATTC CCAAATCGTA CCGTAAGGTG CTCGTCACCA TATTCCTGGC
CCTTACTATG GTATTGATAT ATAGCTACCT AAGAGCATCG ACCGCGGTGT ATCCAGATGT
CAAGCTATTA CAGAACAATT TCGACCAGCC ACATACCAAA CTAGGAACGG TGATCACCGA
TATCAAGATC ATCAAATGCT ACTACCGGAA TTGCAAAGCG CCCGTGGGCT ATTCCAAGAT
CCAGCCTCCC ATGAATTACT ACGAAACAAC TGTAGACTCT TCTGCTACCA CCAAATTGAC
ATCTCCCTTG TATTATATCG TCATTAAGGA GCAGCCCGTA GACACTGCCA CCAACATCCT
TTTAGATCTC ACGTTTGACA AGCCTAAGGA TGACGCTGGG TTCGAACTCA TCAAAAGCGA
CAACTACCAG TTGTACAAGA AGTTTTTCAG CACGAACATC AAGAACCCCA TTCCAAGTGA
TTTGCCTTTG GTGCATTCAC TTGATTTGCT CTTTGGTTCA AACGACCTCA TCGACTCGCG
TGTGAACCAT TTCTCTGTTC ACTCCTCAAT GACGGAAGAA AAGATTCATC CCATCATCTC
GATGTTCAAA TTGCCTCAAT CGAAACAAGA CATCTGGACG CAAGATACTT CGCAATTTGT
GATGATGCAA GAGACAAGCA TTCTTCGTAT TGATGAATCC GTGACCAAGT TCAAAGTGAT
TCAGATGAGT GACTTGCACT TTGGACAAAG TCTTGGTAGA AAATGCGGTA AGGATCAGGA
GTTGTGTACT TCAGACTTGA AAACCTTGAA ATTCATGGAG GACAGTATAC ACAAAGAGAA
CCCAGATTTG GTGGTAATCA CAGGTGACTT GATAGACGTA GACCGTAGTG TCGACTATAA
GTCGATAATT CTCAAGTCGT TACAGCCTAT ACTACAGACA AATACCAAGT TCATATTCAC
TTTTGGTGAT GAGTTTGACG GCCAGGAAAA CCTCAGAGAG ATCAAATTGT CCTTGATTAA
GTTTTTGCAA ACGTTGCCCA ATTGCTACAA CACTATAGAA GGAATTGACG ATAGTTTGCA
TGGAGTTACT AACTACAACT TGAAAGTGAT AAGAGGCGAA AAGGAAGTAG CTCATGTTAC
TGTTTTTGAC TCCGAAGATA AATATCTTGA TGAAACACAG ACCAATTTCT TGTACCGTAT
CCATGCCGAG GACCCTGAGA AATTGTTTAA GTTGTTATTC TTCCATTTTC CCATTCCTCA
GTTCCGTCCC ACTGGAAAGT TCAAGATAAT TGGAAGTTAC AATGAGAAGC ATCCTCTCAA
TTCCAAGACG AAGCCGCAGG TGCTTGATGA TATCCGCAAC TGCGGTTATC AAGTAGTCAG
TGTAGGACAC GAACATGAGA ATGATGCCTG TCTCCTAAAC GAAAAATCTA GTGCTTCAGG
AGAACAGTCT ATCTGGCTCT GCTACAGTAG CGTTGCTGGA GATTCTGGAG TCACTGCTCT
TGATGCCAAC TACGATCGTA AGCTCAGAGT GTATGAAATC GACTTTGAGA AGAGTATATT
GTTGAGTTGG AAGAGAAGTG AAATGAAAAA GAAGGGATTT GACTACCAGC TGGTCTACAA
GTTCCCATCC TTACCTGAGG CACCAAAGGA ACCCAAACCA TAGACATAAG TCGTTGAATC
ATATAGGCAT ATGCAATCTA ATTATTATTT
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| Protein sequence | MSYIVKKIFI PKSYRKVLVT IFSALTMVLI YSYLRASTAV YPDVKLLQNN FDQPHTKLGT
VITDIKIIKC YYRNCKAPVG YSKIQPPMNY YETTVDSSAT TKLTSPLYYI VIKEQPVDTA
TNILLDLTFD KPKDDAGFEL IKSDNYQLYK KFFSTNIKNP IPSDLPLVHS LDLLFGSNDL
IDSRVNHFSV HSSMTEEKIH PIISMFKLPQ SKQDIWTQDT SQFVMMQETS ILRIDESVTK
FKVIQMSDLH FGQSLGRKCG KDQELCTSDL KTLKFMEDSI HKENPDLVVI TGDLIDVDRS
VDYKSIILKS LQPILQTNTK FIFTFGDEFD GQENLREIKL SLIKFLQTLP NCYNTIEGID
DSLHGVTNYN LKVIRGEKEV AHVTVFDSED KYLDETQTNF LYRIHAEDPE KLFKLLFFHF
PIPQFRPTGK FKIIGSYNEK HPLNSKTKPQ VLDDIRNCGY QVVSVGHEHE NDACLLNEKS
SASGEQSIWL CYSSVAGDSG VTALDANYDR KLRVYEIDFE KSILLSWKRS EMKKKGFDYQ
SVYKFPSLPE APKEPKP
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