Gene PICST_83712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_83712 
Symbol 
ID4839661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1251051 
End bp1252066 
Gene Length1016 bp 
Protein Length329 aa 
Translation table12 
GC content41% 
IMG OID640390976 
Productpredicted protein 
Protein accessionXP_001384924 
Protein GI150865626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.113274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAAATGCAGT TGTCTACGCT TCTTAACGTA CAGTATATAC TTGGCTGGTT TGCCGACCAA 
GCTGAGCGAC CAGCAGAAGG GTTGAGACGT CTTGGCCAAG AATTGGAACT TTTCCCTGAG
GTAGAAGATT ATAGTCAATG GCCCCCAAGT ACACCTATAC CCAAACCCGT TGTTTTATGG
CATGGTTTGG GAGACAATTT CAATTCTTCA GGAATGCACA AGGTGGCCAC CATATTTGAG
CTGCTTCATC CTGATATATA TGTCCATTCC GTGCAATTGG CTGAAGATCC AGCTTCAGAC
GAACAAAAGT CATTTGTAGG TGATGCGAAC GAACAGTTGG ACATTGTATG TAAGCAGCTT
CTGAAAGTAC CTCAATTGCG CCAGGGCTTT GATATCGTTG GGTTTTCTCA GGGTGGAGTG
TTCGCCAGAG CATTAGTTGA AAGGTGTTCT CTGATTTCAG TAAGCAATTT GATTACATTT
GGTGCTCCCC ACAATGGAGT TCTGGAACTT CCCATGTGTA AGGATGCCAA TGACTGGCTC
TGTAAGAACA GAAATGAAGT TCTCAAGAAG CTGGTCTGGT TCGATAATGT ACAGAAATAT
ATCATCCCAG CACAATACTT TCGTACTCCA AAGGACTACT CGAGTTATTT GAAGTATTCC
AATTTTTTAG CTGATATCAA CAATGAACGG ACAGAAGTCA ACATTACCTA CAAGAGAAAC
TTAAGTAAGT TGTCTAAGTT TGTAATGGTT ACATTTGATG ATGATACCAC TTTGATTCCC
AAGGACAGCG CTGGGTTCCA GGATATTGAC GCTGAAACGG ATGCTATTAT ACCTTTTGAG
CAAACAATCA TATACACAAG GGATTTGTTG GGACTTCAGA GCTTGCACTC TTTAGGTAAG
ATAGACTTCT ATAGTATTGA AGGTGATCAT ATGCAGATTC CAGAGTCTTT CTTGGTTATG
ATTGGGGTTA AGTATATAGG TTCATATTGG TAGTTATGAA ATAATTGGTT TAAGTG
 
Protein sequence
MQLSTLLNVQ YILGWFADQA ERPAEGLRRL GQELELFPEV EDYSQWPPST PIPKPVVLWH 
GLGDNFNSSG MHKVATIFES LHPDIYVHSV QLAEDPASDE QKSFVGDANE QLDIVCKQLS
KVPQLRQGFD IVGFSQGGVF ARALVERCSS ISVSNLITFG APHNGVSELP MCKDANDWLC
KNRNEVLKKS VWFDNVQKYI IPAQYFRTPK DYSSYLKYSN FLADINNERT EVNITYKRNL
SKLSKFVMVT FDDDTTLIPK DSAGFQDIDA ETDAIIPFEQ TIIYTRDLLG LQSLHSLGKI
DFYSIEGDHM QIPESFLVMI GVKYIGSYW