Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83712 |
Symbol | |
ID | 4839661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1251051 |
End bp | 1252066 |
Gene Length | 1016 bp |
Protein Length | 329 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390976 |
Product | predicted protein |
Protein accession | XP_001384924 |
Protein GI | 150865626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.113274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAAATGCAGT TGTCTACGCT TCTTAACGTA CAGTATATAC TTGGCTGGTT TGCCGACCAA GCTGAGCGAC CAGCAGAAGG GTTGAGACGT CTTGGCCAAG AATTGGAACT TTTCCCTGAG GTAGAAGATT ATAGTCAATG GCCCCCAAGT ACACCTATAC CCAAACCCGT TGTTTTATGG CATGGTTTGG GAGACAATTT CAATTCTTCA GGAATGCACA AGGTGGCCAC CATATTTGAG CTGCTTCATC CTGATATATA TGTCCATTCC GTGCAATTGG CTGAAGATCC AGCTTCAGAC GAACAAAAGT CATTTGTAGG TGATGCGAAC GAACAGTTGG ACATTGTATG TAAGCAGCTT CTGAAAGTAC CTCAATTGCG CCAGGGCTTT GATATCGTTG GGTTTTCTCA GGGTGGAGTG TTCGCCAGAG CATTAGTTGA AAGGTGTTCT CTGATTTCAG TAAGCAATTT GATTACATTT GGTGCTCCCC ACAATGGAGT TCTGGAACTT CCCATGTGTA AGGATGCCAA TGACTGGCTC TGTAAGAACA GAAATGAAGT TCTCAAGAAG CTGGTCTGGT TCGATAATGT ACAGAAATAT ATCATCCCAG CACAATACTT TCGTACTCCA AAGGACTACT CGAGTTATTT GAAGTATTCC AATTTTTTAG CTGATATCAA CAATGAACGG ACAGAAGTCA ACATTACCTA CAAGAGAAAC TTAAGTAAGT TGTCTAAGTT TGTAATGGTT ACATTTGATG ATGATACCAC TTTGATTCCC AAGGACAGCG CTGGGTTCCA GGATATTGAC GCTGAAACGG ATGCTATTAT ACCTTTTGAG CAAACAATCA TATACACAAG GGATTTGTTG GGACTTCAGA GCTTGCACTC TTTAGGTAAG ATAGACTTCT ATAGTATTGA AGGTGATCAT ATGCAGATTC CAGAGTCTTT CTTGGTTATG ATTGGGGTTA AGTATATAGG TTCATATTGG TAGTTATGAA ATAATTGGTT TAAGTG
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Protein sequence | MQLSTLLNVQ YILGWFADQA ERPAEGLRRL GQELELFPEV EDYSQWPPST PIPKPVVLWH GLGDNFNSSG MHKVATIFES LHPDIYVHSV QLAEDPASDE QKSFVGDANE QLDIVCKQLS KVPQLRQGFD IVGFSQGGVF ARALVERCSS ISVSNLITFG APHNGVSELP MCKDANDWLC KNRNEVLKKS VWFDNVQKYI IPAQYFRTPK DYSSYLKYSN FLADINNERT EVNITYKRNL SKLSKFVMVT FDDDTTLIPK DSAGFQDIDA ETDAIIPFEQ TIIYTRDLLG LQSLHSLGKI DFYSIEGDHM QIPESFLVMI GVKYIGSYW
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