Gene PICST_78456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_78456 
SymbolGPX2 
ID4839694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp191021 
End bp191723 
Gene Length703 bp 
Protein Length160 aa 
Translation table12 
GC content44% 
IMG OID640391009 
Productglutathione peroxidase 
Protein accessionXP_001384693 
Protein GI126136339 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.437317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAT TCTACGAGTT GACTCCTAAG GACGCCAAGG GCAACGACTT CCCCTTCGTG 
GAATTGAAGG GCAAGGTTGT CGTTATTGTC AACGTCGCTT CCAAGTGTGG CTTTACTCCT
CAGTACAAGG AGTTGGAAGA ATTGAACAAG AAATACGAAG GCAAGAACGT TCAAATCATC
GGTTTCCCTT GCAACCAATT CGGCCACCAG GAACCAGGCA CTGCCGACGA GATCGCCAGC
TTCTGTCAAT TGAACTACGG AGTCACCTTC CCAGTGTTGG CCAAGGTCGA AGTCAACGGC
GACAACGCCG ACCCAGTGTA CAAGTTCTTG AAGGGCGAGA AGTCCGGAGT TTTGGGCTTG
ACCAGAATCA AGTGGAACTT CGAGAAGTTC TTGATCGACA AAAACGGTAA GGTCGTTGAA
AGATTCTCCT CTTTGGCTAG TCCATCCAGT CTTGGTCCAA AGATCGACCA GTTGTTGAAG
TAATTATTGC ATTATTGCAA TTTTACTTCA CTGAGACTCC AACGTTGAAA TTGTCTCTTG
AAGCTATCAT GCGTTGAAAT CACTTCTTGA TTGTAATTCA GTTTCTTACT GTTACTTTCT
TGGTTCTAAT TTAATTACTT AATTGAGAAG CTACCTGTGT CCCAAAAGGG CACTGCTTCG
CACTATTTAT GTTTGCCATA TCTAATTAAT GCCTATTCTT GAT
 
Protein sequence
MSKFYELTPK DAKGNDFPFV ELKGKVVVIV NVASKCGFTP QYKELEELNK KYEGKNVQII 
GFPCNQFGHQ EPGTADEIAS FCQLNYGVTF PVLAKVEVNG DNADPVYKFL KGEKSGVLGL
TRIKWNFEKF LIDKNGKVVE RFSSLASPSS LGPKIDQLLK