Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_78456 |
Symbol | GPX2 |
ID | 4839694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 191021 |
End bp | 191723 |
Gene Length | 703 bp |
Protein Length | 160 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391009 |
Product | glutathione peroxidase |
Protein accession | XP_001384693 |
Protein GI | 126136339 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.437317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAT TCTACGAGTT GACTCCTAAG GACGCCAAGG GCAACGACTT CCCCTTCGTG GAATTGAAGG GCAAGGTTGT CGTTATTGTC AACGTCGCTT CCAAGTGTGG CTTTACTCCT CAGTACAAGG AGTTGGAAGA ATTGAACAAG AAATACGAAG GCAAGAACGT TCAAATCATC GGTTTCCCTT GCAACCAATT CGGCCACCAG GAACCAGGCA CTGCCGACGA GATCGCCAGC TTCTGTCAAT TGAACTACGG AGTCACCTTC CCAGTGTTGG CCAAGGTCGA AGTCAACGGC GACAACGCCG ACCCAGTGTA CAAGTTCTTG AAGGGCGAGA AGTCCGGAGT TTTGGGCTTG ACCAGAATCA AGTGGAACTT CGAGAAGTTC TTGATCGACA AAAACGGTAA GGTCGTTGAA AGATTCTCCT CTTTGGCTAG TCCATCCAGT CTTGGTCCAA AGATCGACCA GTTGTTGAAG TAATTATTGC ATTATTGCAA TTTTACTTCA CTGAGACTCC AACGTTGAAA TTGTCTCTTG AAGCTATCAT GCGTTGAAAT CACTTCTTGA TTGTAATTCA GTTTCTTACT GTTACTTTCT TGGTTCTAAT TTAATTACTT AATTGAGAAG CTACCTGTGT CCCAAAAGGG CACTGCTTCG CACTATTTAT GTTTGCCATA TCTAATTAAT GCCTATTCTT GAT
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Protein sequence | MSKFYELTPK DAKGNDFPFV ELKGKVVVIV NVASKCGFTP QYKELEELNK KYEGKNVQII GFPCNQFGHQ EPGTADEIAS FCQLNYGVTF PVLAKVEVNG DNADPVYKFL KGEKSGVLGL TRIKWNFEKF LIDKNGKVVE RFSSLASPSS LGPKIDQLLK
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