| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78107 |
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| Symbol | |
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| ID | 4839603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 248169 |
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| End bp | 250364 |
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| Gene Length | 2196 bp |
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| Protein Length | 653 aa |
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| Translation table | 12 |
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| GC content | 48% |
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| IMG OID | 640390918 |
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| Product | predicted protein |
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| Protein accession | XP_001385064 |
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| Protein GI | 150865729 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGTCTATATT GTCCAACTGT TCTCTACGGC CGGCAATTAT ACGTTTCCCA CTACATTACC
GATATCGCTG TCACCTTGCA TTGACTCCGA TAAGCTCTGT GATTATTTTT TCAGATTCTT
GACTTTTTCA TTTTCAAAAT CTTGACTTTC ATTTTCAGAT TTAGTTTCAA CTTTTCAGAA
ATCTCGTAGA CCATGTCAGG ACTTGAATTG CTTGCTGCCG GAATCTTGGG CACGCTGTTG
TTGGAGGCCA AGTACCACTT GCTGGAAGAC TTGTCGATTT TGGCCAAGAT CATCCCCAAT
CTTCCCTACT TGTACCATGC TAAGCACGGA AAGGCCAGTT ATTGGTACAA GTTTGAAAAA
ACGGCCTTGT CCAAGCCAAA CAACACGGCA ATTGCCTTCC CCAGGCCCAA GGCCAACCCT
CCGCCAATCA AGCTTGACTC AGAAGGCTTT AAAATTTATG ACGACCAGTT CACCACAGAA
ACCTACACCT ACAAGGAGTT GTACAACATC ATCTTGAGGT TTTCGCACAT CTTGAAGTAC
GACTATGGGG TCACCGCTCA AGACACCATC GGTGTTGACT GTATGAACAA GCCATTGTTT
ATCTTCCTCT GGTTCGCGTT GTGGAACATC GGTGCCACGC CTGCGTTCTT GAACTTCAAC
ACGAAGGACA AGCCATTGGT ACACTGTTTG AAGATCGCCA ATGTCTCGCA GGTCTTCATT
GACCCCGACT GTGCGGGTCC TATTAGAGAC ACCGAGGAAC TCATCAAGCA GGATGCGCCA
ACTTGTAAGC TACACTACAT GAACGAACCG GAGTTGTTGA AGGTCTTGAC AGACCCTTCC
ACACCCAAGT ACAGAGCTCC TGACAACACC AGAAACCCAC AACACCAGGA CTACGACTGT
TGTGCCTTGA TCTACACCTC CGGTACCACC GGTTTACCCA AGGCCGGGAT CATGTCGTGG
AGGAAAGCTT TTTTGGCTGG TGTGATGTTT GGGCACATTG TCAAGATCAA AGATCTGTCC
AACGTCTTGA CGGCGATGCC ATTATACCAC TCGACTGCTG CTATGTTGGG AGTGTGTCCC
ACACTTTTGG TTGGTGCTAC GGTTTCCATC TCCCAGAAGT TCTCAGCAAC TTCGTTCTGG
ACGCAGGCTC GTTTGGTCGG AGCCACGCAT ATCCAGTACG TGGGTGAAGT GTGTCGTTAT
TTGTTGCACG CTAAACCACA CCCTGATCAG GATAGACACA ATGTAAGAGT TGCATACGGT
AACGGTTTGC GTCGTGACAT CTGGCAGGAG TTCAAGAAAC GGTTCCATGT GGAAGCTGTG
GGTGAGTTCT ACGCCTCCAC TGAGTCGCCC ATTGCTACTA CCAACATGCA ATACGGTGAG
TATGGAGTTG GTGCCTGCCG TAAATTTGGA ACTATTGCCA GTGCACTCTT GAGCACCCAG
CAGACGTTGA TCAAAATGGA ACCTGATGAC GAAGAGGAGG TCTACAGAAA CCCGAAAACT
GGATTCTGTG AAGTGGTTGG GATCAACCAG CCAGGTGAGT TGTTGATGAA GATCCAGAAC
CCGCAGGACA CCAAGGCTTC GTTCCAGGGC TATTACGGTA ACAAAGGTGC CACATCAAAG
AAGATCCTCA GAGACGTATT CAAGAAGGGC GACGCCTGGT TCAGAAGCGG AGACTTGTTG
AAGTGGGACG AGGACAGCAT GTTGTACTTC GTAGACCGTT TGGGAGATAC ATTCCGTTGG
AAATCGGAAA ACGTCTCTGC AACTGAGGTT GAAAACGAGT TGATGGGATC CAAGACCATC
AAGCAGAGTG TCGTCGTCGG TGTCAGAGTC CCTAACCACG AAGGTAGAGC TTGTTTTGCT
GTGTTGGAGC CTCTTGACGA GTTTGCTGAC GAATCCAAGC ACGCCGAAGC CTTGAAAAAG
ATTTACAATC ATGTAATCCA CACGTTGCCC AAGTACGCCA TTCCACAGTT CATCAAGATC
AGTGGAATAG AGGCTTCTCA CAACCACAAG GTTCCTAAGA ACCAATTTAA GAACCAGAAG
TTGCCCAAGG GTGAGTCTGG CACGGAACTC ATTTACTGGT TAAATGGCGA CAACTACGAA
GAGTTGACGG AAGAGGCCTG GGCTACAATT ATCAGTGGAG ACTCCAAGTT ATAGATGTTT
ATATATGTTA TAGAAACTAT ATGTCTATTT TGTTAA
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| Protein sequence | MSGLELLAAG ILGTSLLEAK YHLSEDLSIL AKIIPNLPYL YHAKHGKASY WYKFEKTALS
KPNNTAIAFP RPKANPPPIK LDSEGFKIYD DQFTTETYTY KELYNIILRF SHILKYDYGV
TAQDTIGVDC MNKPLFIFLW FALWNIGATP AFLNFNTKDK PLVHCLKIAN VSQVFIDPDC
AGPIRDTEEL IKQDAPTCKL HYMNEPELLK VLTDPSTPKY RAPDNTRNPQ HQDYDCCALI
YTSGTTGLPK AGIMSWRKAF LAGVMFGHIV KIKDSSNVLT AMPLYHSTAA MLGVCPTLLV
GATVSISQKF SATSFWTQAR LVGATHIQYV GEVCRYLLHA KPHPDQDRHN VRVAYGNGLR
RDIWQEFKKR FHVEAVGEFY ASTESPIATT NMQYGEYGVG ACRKFGTIAS ALLSTQQTLI
KMEPDDEEEV YRNPKTGFCE VVGINQPGEL LMKIQNPQDT KASFQGYYGN KGATSKKILR
DVFKKGDAWF RSGDLLKWDE DSMLYFVDRL GDTFRWKSEN VSATEVENEL MGSKTIKQSV
VVGVRVPNHE GRACFAVLEP LDEFADESKH AEALKKIYNH VIHTLPKYAI PQFIKISGIE
ASHNHKVPKN QFKNQKLPKG ESGTELIYWL NGDNYEELTE EAWATIISGD SKL
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