| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77995 |
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| Symbol | |
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| ID | 4839174 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 994179 |
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| End bp | 998468 |
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| Gene Length | 4290 bp |
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| Protein Length | 1127 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390489 |
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| Product | predicted protein |
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| Protein accession | XP_001384860 |
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| Protein GI | 150865585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGTGAGTTC TCAATTGCAA CACGAGGCAC ACCGTATCAG ACACATAGAT AGCACTACTG
TTCGAGGACC GTTTTATTCT TCTGACCATC ATTCTTACCA TATTTTGAAT TGTAGTGCAG
TGATCTTCAT CGACGATATC AGGAACGAAG ACTGCAAGAT TCTACTACCA CTACAAGACC
AGCAGTATTA CAACAGCTAG CACTCCTCCG TGATATTAGC ACTAGAAACA GCTCCAGCAG
TAACGTCGTT ACCATAATTT GCAGCAGATC CATCCATTTC ATCACATCTG CTTCTAAATC
ATCGACTACT CCACTATATA TCCCCATACC CATCACACCA CCGTAGCCCA TGGACACCCT
CACACCATGA ACCCCACCGC GCCCGTCAAC ACCAACCCGT CGTCGCCTGC GATCTCCATC
ACGCCCTCCA ACTCCAACGG CGCCAATGTC AATGTCTTCA AGTCTCGTAG TCGCGCAGGT
ACCCTTCCTT CGCTGTTCTT GAACACACCC TCGCTACTTC TCAACAACAA TAATAACCTA
AACAACAGCA ACAACTTAAA CAATAACTAC AATAATCTCA ACAATAATAG TAACATCAAT
AATAACAACA ATAATAATTT CTCATTTCCC AACTCAAATG GCTCCTTGTC TACTTCTGCT
TCTCCTTTAG TCAACGACAT TCACCACGAT ACGTTAGGCT TGCCCACCAT GGACTCCATC
TCGTTGGCCG TGTCTGGCTC GTCTCCTTCG CCATCGTCCA ACGCCATCGA CATACCTACC
TCATCTTCAA CTGCTACCCA CGCAGGAGTT CCTACTTCTT CGCGAAGAAT GCGTCTGGGC
TCCCTTTTCT CCACTAATTC TATCTGGAAC GACGACAACG TTTCCGTGCA CTCATCTTCA
CAGCACTCCA ATGGACTTCT CGATAACACA AGTTTACACT CCTTCGATGG CACTACTAAT
TCCAACATCA ACAACATCAA CAATAACAAC AACAATAACA TCGTAAACAG TAATAGCAAT
AATAGCAGCA ATGGATCCGG AAATACTTCG TCATTCATAT CGCCTGTTTT GGCAGCCCAG
AACTCGTCTC TAACTTCTTC TGGAGCTCAT GGAACTACTT CTGCGCTCAA TGCGAATACC
AGAAATAGAT CATACACAAC AACAGCAGCC ATTTCCAACA TCAACATACT CCCTATGACT
AGCTCCAGTG GGTTTCTGAT GGCGGATTCT CATAATTCTT CCAGAATGTC TACTTCTCCC
TTTGTAAACG TCTCTAACAA GACGAATGAC ATGAACTATC TCTTAGATAA CCTCATGCTC
AACATGAACA ACGGCCCTGC TAACGCCAAT CTCTCGAATA TCGTCTCTAA CTCCAGACAC
AGAGCCCAGA CATATTCGGG AACGACTCCC ACTATTCCGG AATCTACTTT AAACCATCCA
CAAGGTGCCC AGGTTTTACA ACAACAGCAA CAACAGCAGC AGCAACAATA CCCTCAAATT
CAACTCCAGT TTCCACACCA ACTTGCTGAA AATGTAGCTT CAGAGCAGCC GGTTTTATTG
AATGACTACG ATTTCTCGCA GTTGGTTATC ACCACCAACT TTGAAAATCC CAGTCTTGGA
CCTACGAGAG TTCTTCTATT TGACAACTTG CCTCAATTCG TAGATGCATT CAAGTTGTAC
AATATCTTGA GCAATTCTCT AGGCAACCAA CGAACTTTGG GAGGAGTCAG AGCTATCAGA
ATAACTTCCA CAGCTTCTTC GAAGCTTGCT CTCGTAGAAA GCAGCTCAGT AGACATAGCA
ATGTCACTCA AGGCCAATTT CAACCATTTG GAGTTGGTAC CTGGCGTGAT TTTATATGTT
GCTTTCGCAA AGATAGTCGA GCCTCAGTCT ACTATAACTC AGCATCAAGC GGCTCCCGTC
GTTCAAGCGA CTGCTGAGAC TGCTGCACCC ATTTCTTCTT CCAATGGAAC TAATGGAAAT
AGCAAGGCTA CTTCAACTAA CGGAGTTTCA GCTTCAAAGC CTAATGGTTC CAATGAATCC
AAGAATACTG ACTTAATTGT TATACAAAAG AGCTTGATTC ACACCATCAG TAAGTTGAGT
ACGAAAGCTA ACCACGCTGA TTTGAACAAG GTGGTCTCGA TTATCAACAA GTCGATTGCT
TATCCAAATG ACCACTACCA AGACAACTTT GGTCCCTTAC CTGATCCAAT ACCTTTGCGT
CAATTTGATT CTCCTAAGTT GAGAGAGTTG CGTAAGATCT TGGAGAATAA CGAAAATGCC
TTGAATAATG AACCGCTCAC GAATTCGTCA CCCGTATCTA GTGGTGATGG AGAAGAAGGT
GACGTTGGCA ACAAAGTCAT GACTCAGTTG GAATTAGAAG AATTGTGTTT GGCTATGCTT
GACGAGTTGC CAGAGTTGTG TTACGACTAC TTGGGTAACA CTATCGTACA GAAGCTTTTC
AATTTGGTTG AGTCGCCCTT AATCAAGTTG ATGATGGTGA AAGAAATCAC TCCCTTCTTG
ACCCAATTGA GTATCCACAA AAACGGTACC TGGGCCATCC AGAAGATCAT AAATCTCTGT
GGAAATGACT TCCAGCAGAA GTACTTGATT GGAGCTAGTT TGAAGCCTTA TGCAGCCAAG
TTGTTCAACG ACCAGTTTGG TAACTATGTT TTACAGGGCT GTATCAAGTT TGGTTCGCCT
TTCAATGATT TCGTTTTTGA AGCAATGTTG GATAACTTCA TCGAGATCAG TTTCGGAAGA
TTTGGGGCTA GATGTATCAG AACGATTCTC GAAACTGCCA ACGAATCCAA TGCCATATCC
AACGAACAAG TAGTGCTTGT GGCAGGACTT ATTGTAGAGT TTGCTAACGA ATTAGTTGTG
AACAACAATG GTTCGTTGTT GATTACTTGG TTCTTAGATA CATTTAACGA CAAGGGTGCC
GCTGTAGATG ACAGATTTGA GTTGTTAACC AATAAGTTTT TGCCACATTT GGCAAAGTTG
TGTACCCACA AGCTTGCCAA TTTGACAATC CTCAAGATCT TGAACAACAG ATCAGACTTG
AAACGGAAAC AGTTGATCAT GGACACCATA TTTGGAAGAA TGGAGGACTA TGAGGGTTAT
TCTGATGAAA TTGACGACTC ATCTAGACCT ACATCCAAAT TACTAGAGTT AATTTTGAGC
GAATATCCAG AAAATGCTGC AGGACCCTTA TTCATTTACA AGATCTTGAC TAACCCCTTG
CTTTTGAACT TGAATGACGT CAAGACTGGA AACAACGAAA TGGATCCTAG AAGAAACTCA
AGATACCAGC AATTTATTGT GGGTCAAATC AGACGAATCT TGTTAGAATT GAACATCACC
AACTTCCAGC CATACAAAAA ATTGATGGAT GAAGCTGGTC TTTCGAGTAA CAGATTGAAC
AGAGCAACTT CTATGACAGG AAACGGAAAA CGTAACAAGA GAGGAGGCAA TTCTCGGTCT
GGCATTAGCA GCCATGGTGT GTCATCTAAG ATTTCACCAG AGTCGGGTGG CATACCTGGG
CAGCCTGTGA TGGCAACTAT GTCGTATGGG GCTCCTCCTC AGTACTATAT TCCTGCTCAA
CAGTACCAGC AACAAAAACC ACTTCCACAA GGATCTCCCA AGGGCTACAA TGCAGTTCCT
CAGATGATGA GAGGTCAAGG AATGCCACCA CAGGGAGTTG TACAGCAACA GTACCAAAAC
ATGCCTCCAA TGATGAACCA GCAACAATAC CCTATTAGTC AACAACCGCT CTACTACCAA
CCAGAACAAC AGATGCATGA ATTGCAACAG CAACAAGATA TCTTAGCCAT GCAACAGTTG
GAGCAATTGT CTTTGAGTTC TGCCGCTTTG GGCTACAATT CAAACCCGGG AACGCCTGGA
GGCAACAACC AAAGAAGTCT GTTCTTCTAG CCAGCAGTAA CCACTGTATA TAAAGGTATG
CAAAAAGACC TGAACTCAAA CTATTTATCA TGTTCATTTA TGAAACAGAA AAAATTACAA
CTTTATACAT TTTTTTATCT ACTCTGAATT TATCTCGACT TTTTCTTTCA TTTCACTTAC
TAAAGCTACG AGGGATGCTA TACAAAAAAA TAATAAGAAA ACTACTGGTT AATGGTTTCT
TTTCTGAAAA TTGTTTGACT TTACTAGGGC CACCATATTG GTGTTACTTC CTTTTTTTCA
CTTGTTTCCA TCTTGTTTCT GGTCACCCAG ACCTGTTATC TAAAAATAGC AACGTATTTA
TAATGTTTAA TAAATAATCA ACCTATCTAA
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| Protein sequence | MNPTAPVNTN PSSPAISITP SNSNGANVNV FKSRSRAGTL PSSFLNTPSL LLNNNNNLNN
SNNLNNNYNN LNNNSLPTMD SISLAVSGSS PSPSSNAIDI PTSSSTATHA GVPTSSRRMR
SGSLFSTNSI WNDDNVSVHS SSQHSNGLLD NTSLHSFDGT TNSNINNINN NNNNNIVNSN
SNNSSNGSGN TSSFISPNSS LTSSGAHGTT SALNANTRNR SYTTTAAISN INILPMTSSS
GFSMADSHNS SRMSTSPFVN VSNKTNDMNY LLDNLMLNMN NGPANANLSN IVSNSRHRAQ
TYSGTTPTIP ESTLNHPQGA QVLQQQQQQQ QQQYPQIQLQ FPHQLAENVA SEQPVLLNDY
DFSQLVITTN FENPSLGPTR VLLFDNLPQF VDAFKLYNIL SNSLGNQRTL GGVRAIRITS
TASSKLALVE SSSVDIAMSL KANFNHLELV PGVILYVAFA KIVEPQSTIT QHQAAPVVQA
TAETAAPISS SNGTNGNSKA TSTNGVSASK PNGSNESKNT DLIVIQKSLI HTISKLSTKA
NHADLNKVVS IINKSIAYPN DHYQDNFGPL PDPIPLRQFD SPKLRELRKI LENNENALNN
EPLTNSSPVS SGDGEEGDVG NKVMTQLELE ELCLAMLDEL PELCYDYLGN TIVQKLFNLV
ESPLIKLMMV KEITPFLTQL SIHKNGTWAI QKIINLCGND FQQKYLIGAS LKPYAAKLFN
DQFGNYVLQG CIKFGSPFND FVFEAMLDNF IEISFGRFGA RCIRTILETA NESNAISNEQ
VVLVAGLIVE FANELVVNNN GSLLITWFLD TFNDKGAAVD DRFELLTNKF LPHLAKLCTH
KLANLTILKI LNNRSDLKRK QLIMDTIFGR MEDYEGYSDE IDDSSRPTSK LLELILSEYP
ENAAGPLFIY KILTNPLLLN LNDVKTGNNE MDPRRNSRYQ QFIVGQIRRI LLELNITNFQ
PYKKLMDEAG LSSNRLNRAT SMTGNGKRNK RGGNSRSGIS SHGVSSKISP ESGGIPGQPV
MATMSYGAPP QYYIPAQQYQ QQKPLPQGSP KGYNAYQNMP PMMNQQQYPI SQQPLYYQPE
QQMHELQQQQ DILAMQQLEQ LSLSSAALGY NSNPGTPGGN NQRSSFF
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