| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72684 |
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| Symbol | TRS33 |
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| ID | 4839617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1466080 |
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| End bp | 1467093 |
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| Gene Length | 1014 bp |
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| Protein Length | 217 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390932 |
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| Product | Transport protein particle 33 kDa subunit (TRAPP 33 kDa subunit) |
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| Protein accession | XP_001384969 |
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| Protein GI | 150865657 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5128] Transport protein particle (TRAPP) complex subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.515239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.385714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CGATGACTGA AGATATTCTT GACACACAAT CCTATGTCAA CAACTCTTGT CTCCAGCTCC
TTCTCCAAGA ACTCGTGCCG ACGTCGATTC GAGTGTCTCA CAGACTCCAC GATTCAACGT
CTACCACAGG AGCTCTGTTA GCGAATCTGA CAGAACCAAC ACAGGCCGAC ACACAGCTTT
CATCGGTTCG AAATGATTTA CCTGGAACGG TTAATGTTCT AGAGTCGTCT CTTCTCAACA
ACGACGAAGT CACATTAAGA ATAGAAACCT ATGGATACAG TTTGGGGCTC AAGTTGGCTG
AAGTGCTTCT CTATAAAAAC ACTACCAGTG GAACTAAGCT AGTGGATATA TTGGATATTA
TGAAGTTCGT GTGTAGAGAC GTGTGGAAAT GTCTCTACAA TAAGCAGATG GACAATTTGC
GGACAAACCA TAGAGGCACA TTTGTATTGG TCGATAACAA CTACAAGTTG ATTCAGAAAT
TGAACAGTCC CAAAGGAATA CACGACACTT TGGCTAAGAG CAGGGTATAT TTGTGGCTAC
CTTGTGGAAT CATACGAGGG ATATTACTGA GTTTCGGCAT TGAGCTGAAC GTGACAGCTG
AAATCACACT GTTTCCAGCC GTTACATTTA ATATCCACAC GGGCATCAAC AATTAACAGC
ATTGCATCGA GCCGATGGGA TAAGTCTTAC AAGAGTCAAA GATAGCTTGA TTCCAATCGA
AAACGGCAGA GTTTAAGAAA TTGCAAGTAA TTGTAGTATT TCAACTCATA CAGAAAAACA
TAATAGTCAA CAAGTCTACA CTTTCTGACT ATACCCTGAT TTATCAATAC GCGTGCTCTC
CATACATAGA ATAACAGCGA CTGTTACCTA TATAGTCTCT TAACAAGTTC TAGTCGGTGG
ACTAGTTTTG GAGCTTCTTC TCGTGTGACA CCACAGCGAT AAAAGATGCT TGTGAATATC
TTCATATCCA AAGAAAGCTC TCGTCCAAAT GATGAACTAC ATTAGAAACA TCTC
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| Protein sequence | MTEDILDTQS YVNNSCLQLL LQELVPTSIR VSHRLHDSTS TTGASLANST EPTQADTQLS
SVRNDLPGTV NVLESSLLNN DEVTLRIETY GYSLGLKLAE VLLYKNTTSG TKLVDILDIM
KFVCRDVWKC LYNKQMDNLR TNHRGTFVLV DNNYKLIQKL NSPKGIHDTL AKSRVYLWLP
CGIIRGILSS FGIESNVTAE ITSFPAVTFN IHTGINN
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