| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72583 |
|---|
| Symbol | RCF2 |
|---|
| ID | 4839169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 1649989 |
|---|
| End bp | 1652000 |
|---|
| Gene Length | 2012 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640390484 |
|---|
| Product | Replication factor C, subunit RFC4 |
|---|
| Protein accession | XP_001385318 |
|---|
| Protein GI | 150865911 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0238341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CTAAAAGCCC AACAAACTTC CAATTCACGC GACTTAAACG TTCCAAGTAT ATAATATATA
TATGAATCGT TTTTGCTGCT ATTGAAAGTG ACTGTAAACA TTTGAACCGC GAAATATGAC
TTCAATTCTT ATGCAAAAGT CGCAGAAGCT CGACCAATAC GAGCAAGAAA GGCTCGAACA
TACGCCGTGG GTTGAAAAAT ACAGACCACG GAACTTGGAC GATGTCGCTT CACAGGACCA
TGCAGTGAAA GTTCTCAAGA AGACGATGGA ATCTGCCAAT TTGCCTCATA TGCTCTTCTA
TGGGCCACCT GGAACCGGCA AGACTTCTAC AATTCTAGCC TTAAGCAAGC AACTATACGG
ACCAAATCTC TACAAAAGTA GAGTGTTGGA ACTTAATGCT TCAGACGAAA GAGGAATCTC
GATAGTTAGA CAAAAAATCA AGAATTTCGC CCGTTTGACT GTGTCTAATC CCAGCAAAGA
AGATTTAGAG AAATATCCCT GCCCACCATA TAAAATCATT ATTCTTGATG AGGCCGATTC
TATGACCAAC GATGCTCAGG CAGCCCTTAG AAGAACAATA GAGAACTACT CGAACATTAC
ACGGTTCTGT TTGATCTGTA ATTATGTCAC AAGAATCATT GATCCGCTTG CATCGCGTTG
TTCCAAGTTC AGATTTAGAT TGTTGAACAA CGAGAATGCC TTGAACAGAT TGAAGTATAT
CGCTGAACAA GAGCATATCA GTCTAGACAG TAACCAGTTG GTACTTCAAG AGGTTTTGCG
TATATCTGGC GGAGATTTGA GAAAAGCCAT CACATTCTTG CAATCTGCTA CTAAGTTGCA
CAAGTCATTA GCAGCTCCTA CAGAAGAAGA TGGAGATATC CAAATGTTGG ATGAGATTCC
AGGAGAAGCT ATAACTGTTG AGTCGATCCA AGAGATCGCT GGGGTCATAC CAGAAAATGT
CATTTTAGAA GTGGTTTCCA CAATCAAATC TAAGAATCTG AAGAGTATCA TCACCCAAGT
AAATGATATC ATATCACAGG GATTTAGTGC TCAACAGGTG CTTGACCAGT TGCATGATAA
GTTCATCTTG GATGATAGCC TAGACTCGGC TACGAAGAAC AAGATCGCCA AGACCCTATT
CTTGATCGAT AAACGTTTGA ATAATGGTAC AGACGAACAT ATTCAACTAC TTGACTTGTG
CCTACAGATC GCCAAATCTT TGTAATATTC TTAAAATAAT CTCATCCAGT TCATTTCATT
AAAATTAATC TATCTACGCC ATTGTCGATA TGGAAATATA CACTTGCAAG AGAGCATGCC
TGGAGGCATC GACCGTAGTA TACAGAGCTA ATAGCTAATT CTAAGTTATG ATGCTAATTC
ATTCAACTGT AATTCAACTG TAGTGTAGCA ACAAAACTGA AGCCAAACAC ATTGCTAATC
ATAATTGGCA TCAACTATGC GAAGTGCAAA TTAACGACGG TTGAGTTGCT GTTGACTTGG
TTGTTGCTGC TGATTTTGCT GCTGATTTGA CTGTTGATGT TGCTGTTGCT GTTGTTGTTG
TTGCTGCTGC TGCTGCTGTT GATGCTGCTG CTGCTGTTGA TGTTGTTGTA AATGAGGTGG
CATACCTGGT GGGAAGCCCA TATATGGAGG AGGGATAAAG CCAGGAGGTC CATTGGGGTT
GCCATTGTTG AAAGGCGGAG GCATACCATG TGGATGTGCA AATCCTGGAG GAAACATTCC
TGGTGGTGGC GGGCCTCCAC TGGGAGTACC AGGGCCAGAG TTACCCAATG GAGGACCCCC
TCTCATGTTA GGTGGAAATT GCAAGTGTGG AGGTGGTGGA CCTCTTCCTT GGAATTGTTT
CATCCAAGGA GGCAATTGTT GTGCTTGTTG TTGCTGCTGC TGAGGAGATT GTTGAAGAAC
TTGCTGGCTT CTAGATTGTT GCTGCTGTTG CTGTTGAATT TGTTGGTGCT GAAGAGCCAT
CTGCTTCATT TGTTCTGGGG ATGGTTGGTT CT
|
|---|
| Protein sequence | MTSILMQKSQ KLDQYEQERL EHTPWVEKYR PRNLDDVASQ DHAVKVLKKT MESANLPHML
FYGPPGTGKT STILALSKQL YGPNLYKSRV LELNASDERG ISIVRQKIKN FARLTVSNPS
KEDLEKYPCP PYKIIILDEA DSMTNDAQAA LRRTIENYSN ITRFCLICNY VTRIIDPLAS
RCSKFRFRLL NNENALNRLK YIAEQEHISL DSNQLVLQEV LRISGGDLRK AITFLQSATK
LHKSLAAPTE EDGDIQMLDE IPGEAITVES IQEIAGVIPE NVILEVVSTI KSKNSKSIIT
QVNDIISQGF SAQQVLDQLH DKFILDDSLD SATKNKIAKT LFLIDKRLNN GTDEHIQLLD
LCLQIAKSL
|
|---|
| |