| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72561 |
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| Symbol | |
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| ID | 4839392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 310409 |
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| End bp | 311942 |
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| Gene Length | 1534 bp |
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| Protein Length | 402 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390707 |
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| Product | predicted protein |
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| Protein accession | XP_001384720 |
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| Protein GI | 150865484 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3774] Mannosyltransferase OCH1 and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.120093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGTGAGGCAC GCTTCATCAT ACACGTATTT ATCAGCTTTA CGGAGACTTC TGCTATCAAA
TTCAAAGCTG AAATCAAAAC TGAACCGAGA ATCAATTTTC ACCTTTCAAT TCTGATCAAA
TCAAACTGGA CTTTTCACCA TCATAAGTGA CAGTATTTTG ATATACAATT TGACTGATTA
CACCGATTAA CTTCAGTATC ATTTCAATTC TATCCAAAGT AAATCACACC ATTTTCATTC
ATGAGTTTGC CAATCTTGCA CAACCGAAAA AGGCCAATAG TGATAACGGT CGTTGTACTA
GTAATACTAT TGTTGATCAC CAAAGTATCG ACTTCGAAAC ACTCAGCCAA AAACATCCAG
GAAGTGCTTC AGAGTCTTCC CAACGAAAAT ATATTAGGTC TCTCCAAACT TGTAAACAAC
GAAAACGAGA AGAGTCAGGA TGAGTTCTTC GCTCGTTTAG AGAAGCTGAA CAAGAAATTC
TTTCTGTCTC AGGAAGCTCG CTTACAAAAA TTGGAGAAAC AAAATGAGTT GTTGCTCAAG
GAAATCAAGT CACTCAAACA ACCTTCAAAC TATGCATCAC TCCGTGAAAG ATTGTTATTT
GTGTATCCAT ACGATTCCTC TGTTCGTTTC CCAGCGTACA TATGGCAGTC TTGGAAACAT
GGGTTAAACG ACGAACGATT TAACGAGAAG TATCGTGAGG GTGAAAGTCA ATGGGCTTGG
AAAAACCCCG GTTTTGTCCA CGAGTTGTTC AACGATGACA CGGCCCATAC GATGATCAAG
TTCCTTTACC ATCAGATTCC AGAAGTTCTC GAAGCATACG AAGCCATGCC TGAAGTCATT
CTCAGAATGG ACTTCTTCAG ATACTTGATC TTATTTGCCA AGGGAGGTGT TTATGCCGAT
ATTGACACAT ACCCATTGCA ACCTATTCCC AACTGGATTC CTGAAAACGT TTCTCCAGAT
GAATTGGGAA TGATTGTTAG CATAGAAACC GACTCCAACT CTCCTAACTG GAGAACGGAA
TCGGTTCGTA GATTGCAATT TGCCCAGTTT GTCATTCAAG CAAAGCCGGG CCATCCAATT
CTCCGTGAGA TCATCGCTCA GATCATCGAG AGAACGTTGC AGAAGCGCAA GGCATTGTTG
GATACCGAGA AGTTGAAGTT AACCGGATCG TCCAACCAAA GAAGCTTGGA TATTTCTCGC
TGGACCGGTG CTGGCTTGTG GACAGATGTC ATATTGAAGT ACTTCAACGA CTACATCCAG
AGTTCCATCT ACCAAAAGAT CACATGGAAA GAGTTCCACG AGTTGAAAAT TCCCAAGTTG
GTCAGTGACA TTTTGATCTT GCCCATCCAT TCGTTTGCAT CTGATATCGA GATTCCAAAG
GACGGAAAGA TTGAGGATCC CCTTGCATTT GTGAAGCACT ATGCGGCAAA GATCTGGAAG
ACCACTTAGC TTCTTCAGCA TATTCAGACA ATTAATGATA GAATATACAA TAGTCTTAGC
TCGCAAGTAG TGTAATAGAA GGCATGAAAC GTAT
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| Protein sequence | MSLPILHNRK RPIVITVVVL VILLLITKVS TSKHSAKNIQ EVLQSLPNEN ILGLSKLVNN
ENEKSQDEFF ARLEKSNKKF FSSQEARLQK LEKQNELLLK EIKSLKQPSN YASLRERLLF
VYPYDSSVRF PAYIWQSWKH GLNDERFNEK YREGESQWAW KNPGFVHELF NDDTAHTMIK
FLYHQIPEVL EAYEAMPEVI LRMDFFRYLI LFAKGGVYAD IDTYPLQPIP NWIPENVSPD
ELGMIVSIET DSNSPNWRTE SVRRLQFAQF VIQAKPGHPI LREIIAQIIE RTLQKRKALL
DTEKLKLTGS SNQRSLDISR WTGAGLWTDV ILKYFNDYIQ SSIYQKITWK EFHELKIPKL
VSDILILPIH SFASDIEIPK DGKIEDPLAF VKHYAAKIWK TT
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