| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72398 |
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| Symbol | SYF2 |
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| ID | 4839121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 513342 |
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| End bp | 515159 |
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| Gene Length | 1818 bp |
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| Protein Length | 590 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390436 |
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| Product | henylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) |
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| Protein accession | XP_001384761 |
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| Protein GI | 126136475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00471] phenylalanyl-tRNA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.84445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0190707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACGACATTCA CCATGCCTAC CATCCCTGTT GACAAGCAAG ATCTCTATGA CCTCTTGGGC
CAGAGTTACA CCACTGAGGA GTTCGACGAA TTGTGCTTCG AATATGGTTT GGAACTTGAC
GAAGACACCA CTGACGATTG TCAGCCTGGA GAGAGACCTC AGTTGAAGAT TGAGGTCCCA
GCCAACAGAT ACGACTTGTT ATGTATCGAA GGGATTGCCC AGGCCTTAAA TGAGTTTTTA
GGAAGAGCCG AGGCCCCAAA GTACACCTTG AAGCCATCGA GTCCTATAGT TACTTTGACT
ATTAAGGAAA CCACTGCAGG TGTTCGTCCA TATGCTGCTG GAGCCATCTT GAGAAACATC
AAGTTTGACC AGCGTCGTTA TGAGTCTTTC ATTGCCTTGC AAGACAAGTT GCACTCGAAC
ATCTGTCGTA ACAGAACACT TGTAGCTATT GGTACTCACG ACTTGGACAC TTTGAGTGCT
CCTTTCACGT ATGAAGGTTT GACCCATGAA GATATCAGCT TTGTGCCTTT GAACCAGGAA
AAGTTACTTA ACGGTAAACA ATTGATGGAG TTCTACGATA AGGACAAGAA CATTGGCAAG
TACTTGCACA TCATCAGAGA CAACGACAGA TACCCTTACA TGTTGGACTC CAACAGAACC
GTAGCCTCTT TGCCTCCCAT CATCAACTCG AATCACTCCA AGATTACATT GGACACCAAG
AACGTCTTTA TTGACATTAC AGGAACTGAC AGAACCAAAA CGGATATTGT TCTTAACCAG
GTCGTAGCCA TGTTTTCTGC CTACTGTGAG ACACCTTTTG AAATTGAACC TGTTCAGGTA
ATAAGTGAAC ATAACGGAGA ATCACGTATT ACTCCTAATG TCACACCAAG ATTGGCACAG
GCAGAGATTG AATACATCAA TTCATGTACT GGTTTGAACT ACGATGCCCA GGGCATCTGT
GACTTGTTGA AGAAGATGTC TCTTGTTGCC AAGCCATCTT CTACTAAAGG ACTTATTGAC
GTAGAGATTC CCATCACCAG ACCAGACGTT TTGCACCAAT GTGACATTAT GGAAGACGTT
GCTGTCGCCT ACGGCTTCAA CAAGTTGACA AAGACAAAGC CACAAAGTGA GTCTTTAGTT
GCTTCTCCAT TACCAGTGAA TAAGATCTCT GACATCTTGA GATTGGCCTC GTCACAATCG
GGTTACTTAG AAGTGTTGCC TCTTACGTTG TGTTCTCACG ACGAAAATTT CAAGTTTTTG
AGAACTGTGG ACGACAACAC TAGAGCCGTC AAGTTGGAAA ACCCCAAGAC CGTAGAGTAC
CAAGTAGTCA GAACCACGTT GTTGCCAGGT ATCTTGAAGA CAATAAAGGA GAACAGAAAG
CATTCTTTGC CTATCAGAGT CTTTGAGGCC GGCGATATCG TTTTGAAGAA CCCAGAGTTG
GAAAGAGGTG CCTACAACCA ACGTAACTGG TCAGCTATCT ACGCCGGAAA GACGTCTGGT
TTCGAGTTTG TGCAAGGTTT GTTGGGCAAA ATAATGCAGA CTATGAGAAC TCCCTGGTTA
GAAAACCCCA AGGAAAACAA GAGCAGAGGC TACTGGATAG AAGAAGACAA AGAAAACCCT
ACCTTCTTCC CTGGCAGAGG TGCCAAGGTT TTCTTTAGAA ACGCCGAAGG TGCTGCAGAA
CAAGAAATTG GTGCCATTGG TGTTTTGCAC CCAGAGGTGA TGACAGCATT TGAGATTCCT
TATGCTGCTT CATCTGTGGA AATCAACGCT GAAGTATTCT TGTAGGGTAT AGACCATTAA
TGTACAGAGA TATAAACT
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| Protein sequence | MPTIPVDKQD LYDLLGQSYT TEEFDELCFE YGLELDEDTT DDCQPGERPQ LKIEVPANRY
DLLCIEGIAQ ALNEFLGRAE APKYTLKPSS PIVTLTIKET TAGVRPYAAG AILRNIKFDQ
RRYESFIALQ DKLHSNICRN RTLVAIGTHD LDTLSAPFTY EGLTHEDISF VPLNQEKLLN
GKQLMEFYDK DKNIGKYLHI IRDNDRYPYM LDSNRTVASL PPIINSNHSK ITLDTKNVFI
DITGTDRTKT DIVLNQVVAM FSAYCETPFE IEPVQVISEH NGESRITPNV TPRLAQAEIE
YINSCTGLNY DAQGICDLLK KMSLVAKPSS TKGLIDVEIP ITRPDVLHQC DIMEDVAVAY
GFNKLTKTKP QSESLVASPL PVNKISDILR LASSQSGYLE VLPLTLCSHD ENFKFLRTVD
DNTRAVKLEN PKTVEYQVVR TTLLPGILKT IKENRKHSLP IRVFEAGDIV LKNPELERGA
YNQRNWSAIY AGKTSGFEFV QGLLGKIMQT MRTPWLENPK ENKSRGYWIE EDKENPTFFP
GRGAKVFFRN AEGAAEQEIG AIGVLHPEVM TAFEIPYAAS SVEINAEVFL
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