| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72245 |
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| Symbol | VAS1 |
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| ID | 4839535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1117239 |
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| End bp | 1120518 |
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| Gene Length | 3280 bp |
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| Protein Length | 1051 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390850 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | XP_001385224 |
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| Protein GI | 126137401 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAGAGTCTCA TACGTGGAAT AGTCATCAGT CTGCCTCTTA AGAATACACT TCCGATTTGC
AGAAGACATT TAGCCACCAT GAGTGACCAG AAAGACAATT CTACTGCTAC TTCGGCTCCT
GCCCCAGCTG AAGGAGCACC AGTAAAGACC GCCAAACAGT TGGAAAACGA ACGTAAGAAG
GCCGAGAAGC TCGCAAAATT CGAAGCCAAG AAGGCCAAGC AAGCAGCTGC TGCCCAATCG
AAGTCGGCTG AGCCAAAGAA GCCCAAGAAG GAAAAGAAGG TTGCCGAACC TGTTCCAGAA
TTTGTAGATG AAACCAAGCC AGGAGAAAAG AAGATTCTTG TCTCTCTTGA GGACGCTGCC
TTCAAAGCTT ACAACCCCAA GAATGTTGAG TCATCCTGGT ACAGCTGGTG GGACAAGGAA
GGACTTTTCC AGCCTGAATT GACTGCCGAT GGTAACATTA AGCCTCAAGG TGCCTTTACT
ATTCCAGCAC CTCCACCCAA TGTCACCGGT GCCTTGCACA TTGGACATGC CTTGACTGTT
TCTATCCAAG ATGCGTTGAT CAGATACTAC AGAATGAAGG GAAAAACTAC ACTTTTCCTT
CCAGGTTTCG ACCACGCCGG TATCGCTACC CAATCTGTTG TGGAGAAGCA GATCTGGGCT
AAAGAGAAGA AGACAAGACA TGACTATGGA AGAGAGAAGT TCGTTGAAAA GGTCTGGGAA
TGGAAGGAAG AGTACCATTC CAGAATCAAG AACCAATTCA AAAAGTTGGG AGCTTCTTAT
GACTGGACTA GAGAAGCCTT TACCTTGAAT CCTGACTTGT CGGCTGCTGT CACTGAAGCC
TTTGTCAGAA TGCACGATGA CGGTACTATC TACAGAGCTA CCAGATTGGT CAACTGGTCC
ACCAAGTTGA ACACTGCTAT CTCGAACTTG GAAGTCGACA ACAAGAACAT TCCTGGTAAG
ACTCTATTGG CTGTTCCTGG CTATGATGAC AAGGTTGAGT TTGGTGTATT GACTTCGTTT
TCATACGAAG TAGATGGATC TGATGAAAAG CTTACTGTAG CCACTACTAG ACCAGAAACC
ATCTTTGGTG ATACTGGTGT AGCTGTTCAC CCCAAGGATC CTAGATACAC GCATTTGCAT
GGCAAGTTTG TGAAGCATCC ATTCTTGGAC CGTTTGTTGC CTATTGTTAC TGACTCTGAA
GCTGTTGACA TGGAATTCGG TACTGGTGCC GTCAAGATCA CTCCCGCCCA TGACCAGAAC
GATTACCAGA CAGGTAAGAG ACAAAACTTA GAGTTTATCA ACATCTTTAC TGATGATGGG
TTCTTGAACG AGAACTGTGG AGAGTACAAG GGCTTGAAGA GATTCGATGC AAGAACCGTT
GTGATTGAAC AGTTGAAGGA AAAGGGCTTG TTTGTTGAAC AAAAGGACAA TGAGATGACG
ATTCCTCTCT GTTCTAGATC GGGTGACGTC ATTGAACCCT TGTTGAAGCC CCAATGGTGG
GTCAACCAGC AAGAAATGGC CAAGGACGCC ATTGCTGCTG TCAAGAACGG TGATCTCACC
ATAACTCCTA AGACATCAGA ATCCGAGTAC TTCTACTGGA TGGAAAACAT CCAGGACTGG
TGTATCTCCC GTCAATTGTG GTGGGGCCAC AGATGTCCTG TTTACTTTGT GGTTGTAGAA
GGCGAAGAAG GTGACAGACT CGACAATAAC TATTGGATTG CTGCCAGATC TCACGAAGAA
GCTTTGGAAA AGGCTCAGAA GAAGTTTGCT GGTGTAAAGT TTACTTTGGA GCAAGACGAA
GACGTTTTGG ACACCTGGTT CTCTTCTGGT TTGTGGCCTA TTTCCACCTT GGGGTGGCCT
AATGCCACTA GAGACATGGA GTTGTTCAAT CCTATGTCAA TGTTAGAGAC CGGTTGGGAT
ATTTTGTTTT TCTGGGTGTC TCGTATGATC TTGTTGTCGT TGAAGTTGAC TGGAAAGGTA
CCTTTCAAGG AAGTATTCTG CCACTCGTTG GTTCGTGATG CTCAGGGCAG AAAGATGTCC
AAGTCGTTGG GTAACGTTAT CGACCCCTTG GATGTCATTG CTGGTATCCC CTTGCAAGGA
TTGCACGACA AGTTGAAGGT TGGTAACTTG GATCCTAGGG AATTACAAAA GGCCACAGAT
GGCCAAAAGC TCTCGTACCC TAACGGAATT CCTGAGTGTG GTACGGACGC CTTGAGATTC
GCTCTCTGTG CCTACTCCAC CGGTGGCAGA GATATCAACT TGGACATCTT GAGAGTTGAA
GGCTACCGTA AATTCTGTAA CAAGATCTAC CAAGCCACCA AGTTTGTATT GGGAAGATTG
GGTGAAGACT TCAAGCCAGC CGAAACCCCA GCTAAAACTG GCAATGAGTC TTTGGTAGAG
AAGTGGATTC TTTACAAGTT GACTCAAGCT ACTGCTAAAA CCAACAAGGC CATTGAAAAC
AGAGACTTCG GTGATGCCAC CAACCACATA TATAATTTCT GGTATGACTT GTGTGATGTC
TATATTGAAA ACTCCAAGGC TTTGATCCAG GACGGTACTG CTGAACAGAA GAAGTCTGCT
CAAGACACCT TGTACACTTG TATCGACTCA TCCTTGAGAT TGATTCACCC TTTCATGCCA
TTTGTAACGG AAGAAATGTG GCAGAGATTG CCTCGTCGTG CTGGTGACTC TACCAAATCG
ATTGTCGTAG CCGCATACCC TGAATACATT AAGGAGTTCG ATGACAAAGA AGCCCACGAA
GCCTATGAGT TGGTCTTGGA AATCACCAAG GGTGCCAGAT CGTTGTTGTC GCAATACAAC
ATCCTCAAGC ACGGCCAAGT GTATGTTGAA ACTGCCAAGA AGGACATCTT CGACATTGCC
TCGGAACAGC ACGACTCCAT CGTCTCGTTG ATCAAGGGTG TTGACAAGAT CACCGTTGTT
TCTAAGGTGG AAGATGTACC TTCTGGTTGT GCCTTGCAAG CCATTGGCCC AGACTGTACT
GTCCATGTGT TGGTGAAGGG CCAAATTGAC TTGGATGCTG AAATTGCCAA GGTGGAAAAG
AAGTTGGACG CTGCTACAGA ATTCGACAAG AAGACCAAGG AGGCCATCGA GAAGTTCACG
GAAAAGACCC AGCCTGCTGC CAAGGAGGCT GCTTTCAAGA GATTGGAGAA GGTCACTGCT
GAAATCGAAG GATACCAACA GACCATTGCC ATTTTGGAGA AGTTGAAGCT CTAGATAGAG
TAGAATGTAA ATACAGAAAT GAAATACAAG AATGGGAAAA
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| Protein sequence | MSDQKDNSTA TSAPAPAEGA PVKTAKQLEN ERKKAEKLAK FEAKKAKQAA AAQSKSAEPK
KPKKEKKVAE PVPEFVDETK PGEKKILVSL EDAAFKAYNP KNVESSWYSW WDKEGLFQPE
LTADGNIKPQ GAFTIPAPPP NVTGALHIGH ALTVSIQDAL IRYYRMKGKT TLFLPGFDHA
GIATQSVVEK QIWAKEKKTR HDYGREKFVE KVWEWKEEYH SRIKNQFKKL GASYDWTREA
FTLNPDLSAA VTEAFVRMHD DGTIYRATRL VNWSTKLNTA ISNLEVDNKN IPGKTLLAVP
GYDDKVEFGV LTSFSYEVDG SDEKLTVATT RPETIFGDTG VAVHPKDPRY THLHGKFVKH
PFLDRLLPIV TDSEAVDMEF GTGAVKITPA HDQNDYQTGK RQNLEFINIF TDDGFLNENC
GEYKGLKRFD ARTVVIEQLK EKGLFVEQKD NEMTIPLCSR SGDVIEPLLK PQWWVNQQEM
AKDAIAAVKN GDLTITPKTS ESEYFYWMEN IQDWCISRQL WWGHRCPVYF VVVEGEEGDR
LDNNYWIAAR SHEEALEKAQ KKFAGVKFTL EQDEDVLDTW FSSGLWPIST LGWPNATRDM
ELFNPMSMLE TGWDILFFWV SRMILLSLKL TGKVPFKEVF CHSLVRDAQG RKMSKSLGNV
IDPLDVIAGI PLQGLHDKLK VGNLDPRELQ KATDGQKLSY PNGIPECGTD ALRFALCAYS
TGGRDINLDI LRVEGYRKFC NKIYQATKFV LGRLGEDFKP AETPAKTGNE SLVEKWILYK
LTQATAKTNK AIENRDFGDA TNHIYNFWYD LCDVYIENSK ALIQDGTAEQ KKSAQDTLYT
CIDSSLRLIH PFMPFVTEEM WQRLPRRAGD STKSIVVAAY PEYIKEFDDK EAHEAYELVL
EITKGARSLL SQYNILKHGQ VYVETAKKDI FDIASEQHDS IVSLIKGVDK ITVVSKVEDV
PSGCALQAIG PDCTVHVLVK GQIDLDAEIA KVEKKLDAAT EFDKKTKEAI EKFTEKTQPA
AKEAAFKRLE KVTAEIEGYQ QTIAILEKLK L
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