| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67950 |
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| Symbol | MCM1 |
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| ID | 4839352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1545473 |
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| End bp | 1547016 |
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| Gene Length | 1544 bp |
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| Protein Length | 243 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390667 |
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| Product | transcription factor of the MADS box family |
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| Protein accession | XP_001385295 |
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| Protein GI | 126137543 |
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| COG category | [K] Transcription |
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| COG ID | [COG5068] Regulator of arginine metabolism and related MADS box-containing transcription factors |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0903461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CGCTTATATA ACACAGCGAC TCAATTACAA GTAACTAGTA AGTATGCCGT GGCTGATGGC
GAGCTCGTGG CCACACGGAT GTGGCCGGCA GCATTAACAG CATAGAACCG TCGAATTGAT
ACAATCGGTG TGACCGGTAG CACTGGGTTT ACGGGAGGTT TGTCCATATT ATTATCACGA
AGCCCTGGAA TGTTGCATTC TCAGCGAATT GTCCCTTTGC ACTGGAGCGT AGCGATGGAT
CACATCGTAT TATCGGATGC AAGGTTGAGA CGAAGCTGAT GATGGCGTAG CTCACGTTGA
TATTGGAATG GGATTGATAG CGACATTGAT GCTGTAGTAA TTGCTATTTC AGGGTCCGAT
AACGACGATA AACAAATACA GATCAATTTC TGGAGTCCAT ACCAATATTT CTATAGCAAA
ACATAGTGAC TATCATCATG TCGTTACATC ATGCTTCGTA ACGTTGCTAT CATTTTTCAT
TCGTGTCATC TATCATTTCT GTTATCATTC TAATGCTGTT GTTGCAATCA TATACAAGTA
AATACTAACA TTATTACCAG AATGTCCGAA GTAACCGAAG CCAAGTTGGA GAACTCCGAC
CAACAATTCG AAAACATCGG TGCTAACGGC GCTGCCAACA AGGGCGGTGC CGATGTTGCT
GGCGACGATG ACGACGACGA CGAAGCCGGC GGTGGTGGAA AGGCCCAGAA GGAAAGAAGA
AAGATCGAAA TCAAATTCAT CCAGGACAAG TCTAGAAGAC ACATCACCTT TTCCAAGAGA
AAGGCCGGAA TCATGAAGAA AGCGTACGAG TTGTCGGTGT TGACAGGAAC CCAAGTATTA
TTGTTGGTTG TGTCTGAAAC CGGTTTGGTT TACACCTTTA CCACCCCTAA GTTGCAGCCA
TTGGTGACCA AGTCTGAAGG TAAAAACTTG ATTCAAGCAT GCTTGAATGC TCCTGAAGAA
GGTTTGGGCG ACGACCAAGG TGACCAGTCA GATGGAAACT CCGGCGAGTC GCCAGATCAA
AGCCCGGCTC CTCCTCAGCA ACAACCCCCA CAACACCAGC AAGTACAACA GCAACAGGCC
ATTGCTCACC AGCAACAGGT GCGCCATCAG CAACAGCCAC AACAGCAATT GCCTCCTGGT
GCACACATAC CCCACGGAAT TCCATATCCT AACGCCGGTC ATCCACAACA GCCAGGCATT
CCTATCCCAC CCAATGCCTA CGGAGACAGT TACCAACAGT ACTTCTCCAA CATGCAAAAC
AGCAACATGC CCAACCAGCA ACAATATCAA TGATGACTAT TTATTAGACA AACAGTGAAC
GAACCCGGAT TCCATTGTAC AGTATTATTA TTATTCTCCT ACCTATTATT ATTTTTGCTT
GTTGAGGTGT CAGTTTATGT TACGTTGATT GAGGTGAGTG TGCTGAGTTG TGTCGACGAG
AAGAGTTGAT TGTGATTGTT ATTGTATTCT TCCAGCGTAT TTAACAGTAC GTAAATATTT
AGTTCTTCTA TTCTTTTTAT AAAACAGTGC TTTCCATTCA TGAT
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| Protein sequence | MSEVTEAKLE NSDQQFENIG ANGAANKGGA DVAGDDDDDD EAGGGGKAQK ERRKIEIKFI
QDKSRRHITF SKRKAGIMKK AYELSVLTGT QVLLLVVSET GLVYTFTTPK LQPLVTKSEG
KNLIQACLNA PEEGLGDDQG DQSDGNSGES PDQSPAPPQQ QPPQHQQVQQ QQAIAHQQQV
RHQQQPQQQL PPGAHIPHGI PYPNAGHPQQ PGIPIPPNAY GDSYQQYFSN MQNSNMPNQQ
QYQ
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