| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67817 |
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| Symbol | |
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| ID | 4839362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 592145 |
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| End bp | 593893 |
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| Gene Length | 1749 bp |
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| Protein Length | 511 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390677 |
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| Product | predicted protein |
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| Protein accession | XP_001384780 |
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| Protein GI | 150865526 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.695962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0282737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGAAGGCTTG TGGCACGTCT ATAGTTAGAA ACACATTGCG CTTGTAAAGA ATACAGCAAT
CTCGATCTGA GATAGAAAGA AAGAAAAGAT TCCACAACGA AAAAATTGTT CTTATCTGAG
ATTCTGAGAT TAGCATTCAT TAGATTTTCA GTTACCTTTC ATAGACGAAA ACAATTACAT
TAAGCATTCC ACAGCAGCAA ATCACTAACA ATAATGCCAA AGTACAATCC ATTTGCCACT
GCGTCAATGC TGCTTGCTGC CAGAAACTTT AGCAGGGCCA CGAGACCAAA CTTAAAAGGT
TCTTTTAATG TTCCTTCCAG AGTGATGAGC AGAAACCATT ACCAAATCAG AGGTTTCCAC
GCTTCGCTTG CTAGAGCGAT AGATTTTGAT CCCTATAAGG TTCTTGGCGT GGACAAGTCA
GCTGACCAGA AGGATATCAA GAAGGCATAC TACACGTTGG TGAAGAAATA CCACCCGGAT
GTGAACAAGG AGAAGGATGC GGAGAAGAGG TTTCACAAGA TCCAGGAGTC ATACGAGTTG
TTGAGTGATA AGGACAAGAG AGCTCAGTAT GACCAGTTTG GCTCTGCAGC TTTTGATGCC
AACGGAAATG CCAATCCATT TGCTGGAGGT CAGAACCCTT TTGCCAGTGG TAACCCCTTT
GGAGGTGCTG GTGGACGGGG AGGAAATCCA TTTGGAGGAA TGGGCTTCGA TTTTGAGGAT
TTGTTCAAAG AAGCATTCAC AGGTGGTGGC AAATCGGGTG GTGGAAGAGG TTCTTTTGTT
ACTGAACATG TTGGAGATAA TATCGAAGTG TTGAAGTCTA TCTCGTTCAA GGAGTCTATA
TTCGGTACTA AGGTACAAGT TAACTATAAG GCTGTTGATA CCTGTAATAC ATGTCAGGGA
AGTGGCTTGA AGACGGGAAA GAAGAAGTCG ACCTGCCCTA CGTGTCATGG CACTGGCCAA
AGTACTCACA TCTTAGGTGG CTTTCATATG TCTTCTACCT GTAGCACTTG TCACGGGTCT
GGGGTTACCA TTCCCAAGCT GGACGAGTGT GGAAGTTGTC ACGGGCACGG TGTTCAGGAA
ATCCCTAAGT CTACAAGTGT AGAATTGCCT TGTGGAATCA GTGATGGCAC CAGATTGAGA
GTTCCTGGAG CTGGTGATGC TCCATTTGTC ACCAAGGATC CATACAATCA GACCAGAAAC
GGTGATTTGA TCATCAGAGT CAATGTAGCT AAAGATCCTA AGTTTTCCAG AATCAACAAT
AACATTGTTG TAACAGAAGA CATATTGATG ACGACTGCTG CTTTGGGAGG TGAAATTGTG
GTTCCCACTA TCGATGGCCA GAACATCAAG CTCAAGATCC GTCCAGGTGT GCAGAATGGC
AGAAAGTTAA CCATTCCAGA AAAGGGTGTA CCGATCAACA GAAACATGAA CAACAGAGGA
GACTTGGAAG TGGTTTTGAA TGTCAAGACG CTTATTCCTG AAACTCCTAT CCAGACAGCT
TTGTTGGAGG CTTTGGCTGA TGCATACAAC GACAAAAATG CCAAACGTAC AGATGCCCAC
TGGAAGTTAG ATTTGGATGA CGACAACAAG AAGGTTGACG AGACTTACGA TGAGAGCGAT
TTGAATCCAT CCAAGTTGAA CAGGATAGGC AAATTCTTGG GCAAATTTTT CAACATGGAC
AACGGAGCCA AGGAAAAGGG CAAACAACAG GATAGTAATA ATAATAATAA TAATAGTAAT
AGCAAGTGA
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| Protein sequence | MPKYNPFATA SMSLAARNFS RATRPNLKGS FNVPSRVMSR NHYQIRGFHA SLARAIDFDP
YKVLGVDKSA DQKDIKKAYY TLVKKYHPDV NKEKDAEKRF HKIQESYELL SDKDKRAQYD
QFGSAAFDAN GNANPFAGGQ NPFASGNPFG GAGGRGGNPF GGMGFDFEDL FKEAFTGGGK
SGGGRGSFVT EHVGDNIEVL KSISFKESIF GTKVQVNYKA VDTCNTCQGS GLKTGKKKST
CPTCHGTGQS THILGGFHMS STCSTCHGSG VTIPKSDECG SCHGHGVQEI PKSTSVELPC
GISDGTRLRV PGAGDAPFVT KDPYNQTRNG DLIIRVNVAK DPKFSRINNN IVVTEDILMT
TAALGGEIVV PTIDGQNIKL KIRPGVQNGR KLTIPEKGVP INRNMNNRGD LEVVLNVKTL
IPETPIQTAL LEALADAYND KNAKRTDAHW KLDLDDDNKK VDETYDESDL NPSKLNRIGK
FLGKFFNMDN GAKEKGKQQD SNNNNNNSNS K
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