| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67783 |
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| Symbol | |
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| ID | 4839635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 358243 |
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| End bp | 360684 |
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| Gene Length | 2442 bp |
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| Protein Length | 551 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390950 |
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| Product | predicted protein |
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| Protein accession | XP_001384728 |
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| Protein GI | 150865490 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5243] HRD ubiquitin ligase complex, ER membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATTTGGTTT TCTTGTACTT TTTCTGCTTA GCGAACTTCG GTGGCCACAA TAAAGCGAAC
CAGAAGCTGA GCTATCTTAT TCTACATCTA ATCCTGATAC TCTGCTACTT CTCAGGATCA
TCCCACAATT TCCGCGAAAC CCTTGAAGCT GCCAGAAGCT ACAGGTACCA CATGAAAAGC
AGGTCTGGAC TCATAAGTTT CCAGTCTGAA AGTCTCAGTC CACTTAAGCA TTACTAATCC
GTGTTTGACA GGTGCTCGTA TTTGTTCGAC CTTAACACGA GACACTATAG TCTCTGTTTC
CACATCTATT GATCTGTTAC AACACATAGA CTCTAACAGA AACTGTTACC ATCCAGATTC
TTATTATACT GAATCCTATT GGATATATTG ATTTACAAAG TCCTGAATCA ATATTCATCA
TATTATTCAC TTGTTCCTAA TTTGCTAATA TTGAAGCATT CGATGCAATA GTCTTCACCA
CCATGTTAGC ACCAGACAAA ACCATCTATT TAGCCATAAG GGAAACCCTG GCGACAGTAC
TTCAAGTTAC TAATCTGCCT ACAAGCACCA CTACTACTGT CACCCAAACC CGGGGTACGC
CGCCTGGGCT GACAGAAACA GACTCCTCAA CCACCGTTCG TACCTCGCCC ACATTTGTGG
GAAATACGCC GTCCACGGTT CTTTTCTTCA TTGCTTTAGC TGTTGGTGTC TTCATTGCTT
TGCTCTTCAT CTTTTTCACC ATCAGATACT TTGTTCGTTC CAAGTATGGA CTTCATGTAT
ATCCACTTCT GCGGAGGCAT TTGATTGCCG GAGCAGCCAT CACCTCCGAT CGTTTCCATG
ACACCATGAC TAACGAGGAG TTGCAGGAGC ATCTCAACTA TATCAGAGAT CACCACTTCA
TCCAGACACT GTTCTTAGAA AGACGGTTCA CTGGCCGTAG AAGACGTAGA AGAAGAGGCC
GTTATTCGCG AATGAAAAAG TTGTCGGAAG CCGAGGTCGA GATTCTATTC CCCAAAAAGA
CCTACACAGA TTGGTTGAAT GGAGGTCAAG AACGGGATCA CGAGAAGCGA GACGGTGTTC
TTCAAGAAGA AGGTAATACT GACTCGGGCA ACTTAAACAT CATCAACGAA GAGGACTCTT
CTGATTTGCA TAGCCAAACC ACTGTCAGTG ATCGAGTTGC ATCTAGTTCA AGAGACATGG
ACAACGACGA CTCCATAGAG TTGCACGAAT TGAAAAACGA AGCCACGAAC TCTGTTTCTG
CAGATGCCGA AGATGACTTG CACTTCACTT CTGGATCTTG TGCCATTTGT TTGGAAACCA
TCGGTGACGA AGACATTGTC AGAGGCTTGA TCTGTGGGCA TGTGTTCCAT GCTGAGTGTC
TAGATCCATG GTTGACTAAG AGAAGAGCTT GTTGTCCTAT GTGCAAGCGA GATTATTTTT
TCAAGAAAGA GGCAGCTGAA AGCACAGAAA CGCAAACCAG TACCACAAAT AACGAAACTA
ACAACAATGT AAATGAAAAT AGCGACATCC AGAACCTGAA TGAAAATACA AACAACAATA
ATGACAATAC GAACAATGTT GATACCAGTA TTATCGATGA TGATGACGAC ACGAGCATTG
ACTATGATGC CATTCGCAGC AATCCCGCAT TCCGAGCTCT TCTTCAGGAA TTAGTTCCCA
TTTCAGAAAG AGTGCGGCAC ATCATGAGTG ACCCGTCGAA CGACCACTTA GACCTTGAAG
TCAGAGCACG TGCAGTGGCC AAGAAGACTT ATGGTCGTTA TTTCAAGGTT CTCTGGTGGA
AGTTGATGGG CATCAGCAAG GAAGACCTTT TCAACTGGGC AGCTTTGACG ATCTTTCAAG
ACTGGAGACG TGCGAACAAC CAAACAGGAA ATGAAGCAGA AAATGAAGCA GAAAATGAAG
CACAGACTGG CTCTACTGCA GAAGGAACAG CTGACTCCAA CGATGGCACC AATACAAACG
ACAGCAACTC CAACAATAAT GGTAATAATA ATGACACCCA TAGCGATTCT TTGGAGTCAC
CAGTTGAAAA CAGAGACATG GAAGAAGTGG ATCTCGGTGA AAGAGATTCG CCAGAGCTTT
CTGCTGCACG CAGAGACGTG GTGGATAATC GAGTATAGAT TTGTAAAGTT ATAGCAGTCT
CTTGCTGTAT CTCCCGACAT ATTTAACTAT TTATTTATTT CTTATTCAAT TCTTGAGCTT
CTGTTTCAAA GAACCACGCG GTGCCACACA GAAACTTCTA TTTCTTAATT TGATTAATTT
ACACCTCAAT CCAGTAACCT AGAATTGATA AAATATCTGG CTGCGAAAAC TAATTTCGCA
GCCACACGGT AATTGTGGTT TGCACCATGA ACAAATGGAA ACCATCGTAC TGTGACCCTA
GCTTATACTA TGACCCTAGT TAATAATATG ACCTTTTGTG TT
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| Protein sequence | MLAPDKTIYL AIRETSATVL QVTNSPTSTT TTVTQTRGTP PGSTETDSST TVRTSPTFVG
NTPSTVLFFI ALAVGVFIAL LFIFFTIRYF VRSKYGLHVY PLSRRHLIAG AAITSDRFHD
TMTNEELQEH LNYIRDHHFI QTSFLERRFT GRRRRRRRGR YSRMKKLSEA EVEILFPKKT
YTDWLNGGQE RDHEKRDGVL QEEGNTDSGN LNIINEEDSS DLHSQTTVSD RVASSSRDMD
NDDSIELHEL KNEATNSVSA DAEDDLHFTS GSCAICLETI GDEDIVRGLI CGHVFHAECL
DPWLTKRRAC CPMCKRDYFF KKEAAESTET QTSTTNNETN NNVNENSDIQ NSNENTNNNN
DNTNNVDTSI IDDDDDTSID YDAIRSNPAF RALLQELVPI SERVRHIMSD PSNDHLDLEV
RARAVAKKTY GRYFKVLWWK LMGISKEDLF NWAALTIFQD WRRANNQTGN EAENEAENEA
QTGSTAEGTA DSNDGTNTND SNSNNNGNNN DTHSDSLESP VENRDMEEVD LGERDSPELS
AARRDVVDNR V
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