Gene PICST_65824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65824 
SymbolRMD8 
ID4839614 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1452034 
End bp1454303 
Gene Length2270 bp 
Protein Length611 aa 
Translation table12 
GC content45% 
IMG OID640390929 
Productnuclear division protein 
Protein accessionXP_001385281 
Protein GI150865887 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.360229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCCATTTATA TCTCAATTCT CTCCCAAAGC AATGAGTGGC TCACGAGCGT CGAGTTCGGC 
GACTCCAACC GGACAGCGGC CAACAGCCAA AAGATCTCCG TCCATTTTGG TAACAGATTC
CAGAACCCAT ACCATCAAAG GTACACGAGC TCCGTTTGCT GGGCACAACT ATAAGAAACA
ACAGCAGCAA CAGCAGCAAC AGTTGCTCCA GCAACAACAG CTTCAAAAGC AACAACTGCT
GCAGCAGTCA CAACAACAGC ATCTACATCA GAACACCCTG AACCAGAGTC TGAGTCTGAT
CCATAACTAT GGATTTCAGC AAGATCAACA CCAATCAGCG CTACAGAAAC GACTAGCTTT
CAGAAACAAG TACACTGATA TCTCCGTCGA TAAACTACTC AGCAATAGTA GTGACATTCC
CTCCGGCCAA CTGAGACTAC CTCCACTTAT CTCTAGCACC AACCGTAGAG CATCTTCTCC
GCTTGGCTCA CAACGTTCGC CGTCTCCTCC CGTAGCTAGT CTCCGTGCAA ATGGGCTTAG
ACGTAATATC AGATCTATTC CCAAGCTCTC ACTGTCATTA CCTCTGAGAA CATCCAAAAC
ATCCCAGAAA TTGGTGTTGA TTCCTGAGCT GCAGCGCTAC CATACGAACT CTCCACCCAA
TCTTCCTCCT AATTCTACAT CTACACTGAG TCAAGCTTCA GCTGGAGCTG TTGTAGACGT
CGAACTTCAG GCACAGATAG AGCGTTCACG TGCGGAGATG ATGTCCAAAG ATGCAAGAGC
GCAGGAGTTC AGCCGGATGA CGGCGTACTT TATATGTGAA CAGTTTAATC TTGCAGGAGT
TTCCAAGTTT TTGCGAGAAA ACCACGAAGT CAAGCCGAGG ATGTACGATG AGGCTCTTTA
TGTTCCTTAT GCGTTACCTT TATTACCTGG AGCAGACGGT TTTCGCGTCA AATCAAACAA
CTCTGCCAAA TTACTACCGA ACAAGAGGTA CATGGAAAAG ATGATAAACA AGAGTGAACA
GACTGACCAC TTGTATGAGT ACTATTCGGG TGTGGAGACA CCTGAAGATG CCAACAACTA
TTCAATGGAT CCTGAGCTTG AGAATTTTGA CAGCAGCTCG CCATTTGATC CCCTGGAGCC
GCAATTCTTC GCGCCACCCT TAGAGACTAG CGGGATCAGT GAGGATGGAG TAAATAGCAT
CTCCAGCAAT GGTGAAACAA CCAACAGTGA GCCTGCGGAT GTAGAAGCTG CGGGTTTAGA
AGGGACCGAT GTTTTAGCTA GCGGTGAGGG CGAAGTAGGC GCTAGTCAAA GCAGAGCCGT
GGACACCAGT GAATCCAAGG AAACGTCACC GTCATCTGAT TCCAAACGTT CGCACTCTAT
ACACAGCTCA CTCCATAGTC AGGCTGAAGT TTCTAAACAC CATGCTGAAA TGTTTGTGTT
TGCCTATGGC ATTGTCGTAT TCTGGAACTT TTCCGAGATT CATGAGAAAA ACATCTTGGC
TGATTTGGCG TTTGCTGATG AACCTCAACC TTTACTTATC CATCCCATAG ATGAGCAGGA
CATAGAGACA GAAGAGTTCC ACTTTGAATA TGACTCCCAG ATCCACCGTC CCCGTATATA
CAACGACATG ATCACCTTGC GTTCGGGGGA CCATCTCATT AAACTCACGA TGTCGCATGC
CATCGCGCAG CTGACAAAGT TGTGTCTTTT CGAAAGTCGG ATGGTTAATA TCTTACAGCT
GATTTCCAAG ATGCCTAAGA AATTAGCCTT GACAGGAACT TTAGGATTGA AACGTACGCA
ACTCTTGAAG AAGTCAGGTA AGCTCTTCAA GTTAAGAGTC GACGTCAATC TCTCGAGCTC
AATCTTGGAC ACACCGGACT TCTTCTGGTC CATCGAACCA GCTCTACACC CATTGTACAA
CGCTGTACGG GAATACTTGG AGATCGATCA ACGTGTACAG GTCTTGAACG ATCGTTGCAA
GGTCTTTTTG GAGTTTGTCG ATATCGTCAG CGATAGTATG AACGAGAAAA ACACAAACAG
AATCACTTGG ATGATAATTG TCATCATCTT TTTGAGTTTA ACTGTCAGTG TGTTTGAGTT
CTTTCTAGAG GTGATATAGA CTGAGCATTG AGAATTGCTA ATATCCCAAA AATCTTGAAT
GCCTTGAAAT TCACCTACAA ATTAATCATA ATTCATCTTC GTCATCGCAT ACTGTTCAAG
TACTATATAG CATCACCCAT TAGCATATCC TTAAATAACT CGAGTTTAAC
 
Protein sequence
MSGSRASSSA TPTGQRPTAK RSPSILVTDS RTHTIKGTRA PFAGHNYKKQ QQQQQQQNKY 
TDISVDKLLS NSSDIPSGQS RLPPLISSTN RRASSPLGSQ RSPSPPVASL RANGLRRNIR
SIPKLSSSLP SRTSKTSQKL VLIPESQRYH TNSPPNLPPN STSTSSQASA GAVVDVELQA
QIERSRAEMM SKDARAQEFS RMTAYFICEQ FNLAGVSKFL RENHEVKPRM YDEALYVPYA
LPLLPGADGF RVKSNNSAKL LPNKRYMEKM INKSEQTDHL YEYYSGVETP EDANNYSMDP
ELENFDSSSP FDPSEPQFFA PPLETSGISE DGVNSISSNG ETTNTVDTSE SKETSPSSDS
KRSHSIHSSL HSQAEVSKHH AEMFVFAYGI VVFWNFSEIH EKNILADLAF ADEPQPLLIH
PIDEQDIETE EFHFEYDSQI HRPRIYNDMI TLRSGDHLIK LTMSHAIAQS TKLCLFESRM
VNILQSISKM PKKLALTGTL GLKRTQLLKK SGKLFKLRVD VNLSSSILDT PDFFWSIEPA
LHPLYNAVRE YLEIDQRVQV LNDRCKVFLE FVDIVSDSMN EKNTNRITWM IIVIIFLSLT
VSVFEFFLEV I