| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60980 |
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| Symbol | MDR6 |
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| ID | 4839312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1704524 |
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| End bp | 1706101 |
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| Gene Length | 1578 bp |
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| Protein Length | 526 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390627 |
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| Product | multidrug-resistance transporter |
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| Protein accession | XP_001385332 |
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| Protein GI | 150865921 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.573289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAGGAGGAAG TATTTGAAGA AAGTAATGCC GGAGATGGAA CAAGACGAGA GGACCAATAT
CTCCATGGAT ACAGACTAGC TCTATGTGTG GTTGCACTTT TGCTCAGTTT GTTCATTATG
TCTATAAGCC AGACAATCAT TCTCATAATT CTTACCGAAG TCGGTAACAA ATTTGACGGG
GTCGGCAAAA TCAACTGGAT CACTTCGGGA TATCTTTTGG CAATAGCTGT GCTAACGCAA
ACATGGGGCA AACTCTCAAT TCTTATTGGT AGAAAGTTGA CATTGAGCAT ATCGTTGATA
TTTTTTGAAG CAGGTACTCT ACTTTGTGCT TTATCCAACA GCATGGATAT GTTGATTGGT
GGAAGGGTAT TGGCTGGTGT AGGTGCTGGA GGAATCCAGG CTTCTGTGTT TGTCGTATTG
AGTGAAGTAC TTCCTATCCA ATATCGTACC TACGGGATGA TGTTAATGTC TATGACAGGT
ACAACAGCTT CAATTATTGG TCCCTTGATA GGAGGGGCGC TTTCAAGAGT TAGTTGGAGA
TGGTGCTTCT ATTTCAATAT CCCTATTGGA GGAGCAGCTT TTGTATACTT GCAACTTTTC
TTCAATCCGC CAAAGCCAAA AGGGAAGTTA TTGAAAAAGT TGAAGTTGTT GGATTACGTA
GGAACATTAC TTGTTTGCGG TGCCGCAGTA TTGATTCTAC TTGGGCTCAG TTTTGGGTCC
AACCAAGAAT TTGATTGGAA ATCTGCTCCC GTTATTGTCT GCTTGACCGT AGGGGGTCTC
CTACTTATTG CGTTCTTGAT TTGGAACTTC AATTACTCAA AATATCCACT AATTCCGGTT
GATGTGGCTA AATCATGGCA AGTGGAAGCT TCGGTTTTGA CAGGATGTGC CATGTTTGGC
TACTTTTTCT CTAACCAGAT TTATATTTCA GTCTACTTTC AGGTTATACA CGGCTGGAAT
GCTTGGGAAT CTGGACTTCA TCTCTTGCCG TTGATTATTT CCTCTGTGAT AAGTTCAATC
GGAGGATCAC TACTTATCCA GAAGACCAAA TTTATCAAGC CATTTTCTAT ATTTGCAGCC
GCTTGTGGAC TCGTGGGAAA TTCCATCTTG TATTTGTTGG ATGTGGACTC GAATTTAGCA
AAGATTATTG GTTTGCTTAT TTTACCTGGC TTATCTACGG GTATGCAAGT CCAGTCGACA
GTTATGCTTG TTCAAGTTTC TGCTCCCAAG ACTGCTGGAA GTACAATTAT GGCTACTACA
TACTACAACT TCCTTAGGAC ACTTTGTGGG GCTGTCGCTG CTGATTTGGC TACGCTTACG
TACAATGAAT CGCTCAAAAG TAAATTGACA CATGCCCTAA GTAATATCAC TGATCCTGCC
TTGGCTCAGG AACTCAGTTC TATAGAGTTG TCGGAAATTT TGTCTAACAC CACGATTCTC
AATCAATTAT CTCTGGCTGC GCAGTACTTC ATCAAAAACG AGATTATGGG TGCAATCAGA
AATGTTTTCC ACGTAAGTGC TGGATTCGGA GGGTTATGCT TGATAGCTTC ATGCTTTCAG
GTTAACCACC GGTTGCCT
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| Protein sequence | KEEVFEESNA GDGTRREDQY LHGYRLALCV VALLLSLFIM SISQTIILII LTEVGNKFDG
VGKINWITSG YLLAIAVLTQ TWGKLSILIG RKLTLSISLI FFEAGTLLCA LSNSMDMLIG
GRVLAGVGAG GIQASVFVVL SEVLPIQYRT YGMMLMSMTG TTASIIGPLI GGALSRVSWR
WCFYFNIPIG GAAFVYLQLF FNPPKPKGKL LKKLKLLDYV GTLLVCGAAV LILLGLSFGS
NQEFDWKSAP VIVCLTVGGL LLIAFLIWNF NYSKYPLIPV DVAKSWQVEA SVLTGCAMFG
YFFSNQIYIS VYFQVIHGWN AWESGLHLLP LIISSVISSI GGSLLIQKTK FIKPFSIFAA
ACGLVGNSIL YLLDVDSNLA KIIGLLILPG LSTGMQVQST VMLVQVSAPK TAGSTIMATT
YYNFLRTLCG AVAADLATLT YNESLKSKLT HALSNITDPA LAQELSSIEL SEILSNTTIL
NQLSSAAQYF IKNEIMGAIR NVFHVSAGFG GLCLIASCFQ VNHRLP
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