Gene PICST_60928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60928 
Symbol 
ID4839373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp166994 
End bp167725 
Gene Length732 bp 
Protein Length243 aa 
Translation table12 
GC content42% 
IMG OID640390688 
Productpredicted protein 
Protein accessionXP_001384686 
Protein GI150865462 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.20813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCC TCTACAGTCC AGCGCTGAAT CTGTTGATGG AGATCTGTAT GGTGTCAGCT 
GGAATTGGTG GTGCCATAGG AATTCTCCTG ATCAGCTATT TTCACGCTGA TTCTAAGTAC
TCCAACCTCA TAATATATGG TTTGTTTCTT CTGCTTTACT TCCAGATTGA ATTCTCGTTC
ACATATCTTT TCAACCCCAC AAGAGTTACC AGCAAATCGT TCTTGATCTA TGGAAATCGA
GGAAACCTCC AGTTTTGGGC CATGCAAACA TTTGCTGTTT GGGAATATTT GGTGCATCGT
AGCTCCATCA TTTCCTTTGT CACCAATTGT TTTCTTGACA ACCAAGTAAT ACCGAGAATA
GGGATAGCCA TGATAGTTTC TGGACTTATA ATACGGGCCT GGGCTATCCA GACCTGTGGC
TCTTCATTCT CTCATCTCAT AGAGACTGAA AATAGACGCA AAGATCACGT ACTTGTCACT
TCTGGTATCT ACAGCATCTT GAGGCATCCC AGCTACTTTG GGTTCTGGTG CTTTGCTATA
GGAGCCCAAC TATTGTGTAT CAATTGGCTC AACCTCATTG CTAATATAGT GATATTGGCC
CATTTCTTCA CAGTACGTAT TGAGTTTGAG GAATACTTCT TGATCCACAA GCTTTTTCAT
GAAGAGTATG TAGAGTATAA GAAGAAGGTC GGGGTGTGGA TTCCTTTTGT CAGAATCAAA
GACAATATAT AG
 
Protein sequence
MSSLYSPASN SLMEICMVSA GIGGAIGILS ISYFHADSKY SNLIIYGLFL SLYFQIEFSF 
TYLFNPTRVT SKSFLIYGNR GNLQFWAMQT FAVWEYLVHR SSIISFVTNC FLDNQVIPRI
GIAMIVSGLI IRAWAIQTCG SSFSHLIETE NRRKDHVLVT SGIYSILRHP SYFGFWCFAI
GAQLLCINWL NLIANIVILA HFFTVRIEFE EYFLIHKLFH EEYVEYKKKV GVWIPFVRIK
DNI