Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60928 |
Symbol | |
ID | 4839373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 166994 |
End bp | 167725 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390688 |
Product | predicted protein |
Protein accession | XP_001384686 |
Protein GI | 150865462 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.20813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCC TCTACAGTCC AGCGCTGAAT CTGTTGATGG AGATCTGTAT GGTGTCAGCT GGAATTGGTG GTGCCATAGG AATTCTCCTG ATCAGCTATT TTCACGCTGA TTCTAAGTAC TCCAACCTCA TAATATATGG TTTGTTTCTT CTGCTTTACT TCCAGATTGA ATTCTCGTTC ACATATCTTT TCAACCCCAC AAGAGTTACC AGCAAATCGT TCTTGATCTA TGGAAATCGA GGAAACCTCC AGTTTTGGGC CATGCAAACA TTTGCTGTTT GGGAATATTT GGTGCATCGT AGCTCCATCA TTTCCTTTGT CACCAATTGT TTTCTTGACA ACCAAGTAAT ACCGAGAATA GGGATAGCCA TGATAGTTTC TGGACTTATA ATACGGGCCT GGGCTATCCA GACCTGTGGC TCTTCATTCT CTCATCTCAT AGAGACTGAA AATAGACGCA AAGATCACGT ACTTGTCACT TCTGGTATCT ACAGCATCTT GAGGCATCCC AGCTACTTTG GGTTCTGGTG CTTTGCTATA GGAGCCCAAC TATTGTGTAT CAATTGGCTC AACCTCATTG CTAATATAGT GATATTGGCC CATTTCTTCA CAGTACGTAT TGAGTTTGAG GAATACTTCT TGATCCACAA GCTTTTTCAT GAAGAGTATG TAGAGTATAA GAAGAAGGTC GGGGTGTGGA TTCCTTTTGT CAGAATCAAA GACAATATAT AG
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Protein sequence | MSSLYSPASN SLMEICMVSA GIGGAIGILS ISYFHADSKY SNLIIYGLFL SLYFQIEFSF TYLFNPTRVT SKSFLIYGNR GNLQFWAMQT FAVWEYLVHR SSIISFVTNC FLDNQVIPRI GIAMIVSGLI IRAWAIQTCG SSFSHLIETE NRRKDHVLVT SGIYSILRHP SYFGFWCFAI GAQLLCINWL NLIANIVILA HFFTVRIEFE EYFLIHKLFH EEYVEYKKKV GVWIPFVRIK DNI
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