| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60924 |
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| Symbol | VMA4 |
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| ID | 4839515 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 478160 |
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| End bp | 478961 |
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| Gene Length | 802 bp |
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| Protein Length | 226 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390830 |
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| Product | vacuolar ATP synthase subunit E (V-ATPase E subunit) (Vacuolar proton pump E subunit) |
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| Protein accession | XP_001385104 |
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| Protein GI | 126137161 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1390] Archaeal/vacuolar-type H+-ATPase subunit E |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.160029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAT CCGAGGAACA AGTATGTAGT GAGAATATCA CAATTGTCTT TTCTGCTGAG
AATTCGGCAC ACTTTTGACA GAATTCGTTT ATATGAAAAT CTACAAGAAG TTCCAGTCAA
GTAATTAATA CTAACCAAAT AGGTGAAATC TGAGCTCTCC AAGATGCAAG CCTTCATTGA
GAAGGAAGCT AGAGAAAAAG CTAAAGAGAT CAAGTTGAAG GCAGACGAAG AGTACGAAAT
CGAAAAAGCT TCCATTGTCA GATCTGAAAC AGCTGCTATT GACTCTACCT ATGAACAGAA
GCTCAAGAAG GCTTCATTAG CCCAACAGAT CACCAAATCT ACCATTGCCA ACAAGACCAG
ATTGAGAATC TTGTCAACCA AGGAAGAGGT TTTGAACGAA ATTTTTGACG AAGCTGAGAA
GGAATTGAAG AAAATCACGA CTGACAAAAA GCAGTACTTG CCAGTGTTGG TGGGTTTGAT
TGAAGAAGGT GTCTTAGCAT TGTTGGAAGA AAAGGTCTCC ATCAAGGTTA GAGAAGAAGA
CGTAGCTGTT GCTAAAGAAG CCATCGTAGA AGCTGCTAAG AACTTTACAG AGAAGGCCAA
ATTCGATGTA GAGATCTCTA TCGACGAGTC AGACTACTTG AGCAAGGACA TTGCAGGTGG
TGTCGTTGTT GTAAATGGAA CTGGAAAGAT CGAAGTCAAC AACACCTTGG AAGAAAGATT
GAAGATATTG TCACAGGAGG GATTGCCAGC CATCAGATTG GAGTTGTTTG GACCTTCTGC
CTCTAGAAAG TTCTTTGATT AG
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| Protein sequence | MPLSEEQVKS ELSKMQAFIE KEAREKAKEI KLKADEEYEI EKASIVRSET AAIDSTYEQK
LKKASLAQQI TKSTIANKTR LRILSTKEEV LNEIFDEAEK ELKKITTDKK QYLPVLVGLI
EEGVLALLEE KVSIKVREED VAVAKEAIVE AAKNFTEKAK FDVEISIDES DYLSKDIAGG
VVVVNGTGKI EVNNTLEERL KILSQEGLPA IRLELFGPSA SRKFFD
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