| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60854 |
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| Symbol | TNA12 |
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| ID | 4839080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 688206 |
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| End bp | 689729 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390395 |
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| Product | transporter of Nicotinic Acid |
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| Protein accession | XP_001385137 |
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| Protein GI | 126137227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.377771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTG AAAAAGGGTC TCCCACCTAC CTTGTTAGTG ACCCGGAGAA TGCCTCTGAC
GCCTCATTAT TCAAGAACTC AACCGAAAGC TTCGAAGATC CAGAATCTGA AGTCGAAAAA
CTTGCCGAAA GCTTGGGTGT TAATCATTCC AAATTGATGA GAAAAATTGA TCTATGTGTT
GTTCCTCCCT TCTGTCTTCT ATACTTCCTT TCGTTCTTGG ATAGAGTCAA CATTTCAAAT
GCTAAGCTTT ACGGTCTTGC GGAGGACCTT AACTTGACTG GTAACCAATA CAACATTGCC
TTGACTGTCT TCTTTGTTCC TTACGTTGTC TTTGAAGTTC TCGCCAACTA CTGTATCAAG
TTCGTTAAGC CACACATCTG GTTGAGTGTC TTGATTTTGT CTTTCGGTGC TATCTCTATT
GGCATGGGTT TTGTGACAAA CTTTGGCGGT CTTGTTGCCT GTCGTTTCTT GATTGGTATC
ACTGAAGCTT CGACTTTCCC ATCGATCTTC TACTTACTTT CTACATACTA CTCTAAGCAC
GAATCTCAGA GACGTTTCTC TGCTTTCTTC TCGTGCACTG CCCTCGCTGG TGCAGCATCT
GGCGCTATTG CATTCAAAAT CCACGACATT GACGGTGTAA AGGGTTTGGC ATCTTGGCAA
TGGATCTTTG TTATTGAGGG CATTGCCACC TGTGGTTGTG CCTTGGTCCT ATTCTTTACC
ATTGCTGATT TCCCAGAAGA ATCAAGATTC CTCAAGGAAA ATGAACGAAA GTTCTTGAAG
AGAAAGTTGG AAATATTAAG TGGTACTTCA TCTGCTTACG AAATTAAGAA CACTTTCGCT
GATGTCGCAA AATGTTTCAA GGACATTTTG ATCTGGTTGC CAGCTCTTTC TTACTTCGGC
TTGATTATTC CTTCTTACGG TTACGCTTTC TTTGCTGCAA CTATCATTAA TCAGATGGGT
TACACTGCCG TGTCAGCCAA CCAACACTCC GTCTACCCAT GGTTGTGTGC TTTTGGATTA
ATAAATATTA CTGCATTTGT CTCCGATAGA TTTAAGAGAA GATTACCTTT TGCTATTGGA
GCCTCCCTTT TGGCTATTGT CGGATTGGCC ATGGTTTTAG GCGCTACCGA GAACGCCAGA
GTTAGATATG GTGGTTGTTT CTTAGCAGCC TCTGGTTTGT ACACGGCCAT GCCAATGGTT
GTCTGTTGGG CTGCTTTGAA CAACGGTTCC CATATCAGAA AGTCTGTAGG CACTGCTTGG
CAAATTGGTT TCGGTAACAT CGGTGGTATC ATTGCTACCT TCATCTTTTT GGCCAAGGAC
GCTCCAGTGT ACAAGCCTGG TTTGAGTACA TGCATTGCAG CTGTTTGCTT CTCAATGCTC
TGTACCTTTG CTTACTTCTT CGCTGTGAGA AGATTGAACC ATGTTAAGCA GACCGAATCA
TACCAAACTA AGTTCGAGCA ATTGCCTGAA AGAGAACAAG TCATCCTTGG TGACAGAAAC
CCAAGATTTG TCTACTTGTA TTAA
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| Protein sequence | MSIEKGSPTY LVSDPENASD ASLFKNSTES FEDPESEVEK LAESLGVNHS KLMRKIDLCV
VPPFCLLYFL SFLDRVNISN AKLYGLAEDL NLTGNQYNIA LTVFFVPYVV FEVLANYCIK
FVKPHIWLSV LILSFGAISI GMGFVTNFGG LVACRFLIGI TEASTFPSIF YLLSTYYSKH
ESQRRFSAFF SCTALAGAAS GAIAFKIHDI DGVKGLASWQ WIFVIEGIAT CGCALVLFFT
IADFPEESRF LKENERKFLK RKLEILSGTS SAYEIKNTFA DVAKCFKDIL IWLPALSYFG
LIIPSYGYAF FAATIINQMG YTAVSANQHS VYPWLCAFGL INITAFVSDR FKRRLPFAIG
ASLLAIVGLA MVLGATENAR VRYGGCFLAA SGLYTAMPMV VCWAALNNGS HIRKSVGTAW
QIGFGNIGGI IATFIFLAKD APVYKPGLST CIAAVCFSML CTFAYFFAVR RLNHVKQTES
YQTKFEQLPE REQVILGDRN PRFVYLY
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