Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60825 |
Symbol | |
ID | 4839560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1213878 |
End bp | 1214216 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640390875 |
Product | predicted protein |
Protein accession | XP_001385240 |
Protein GI | 126137433 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0777781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.500519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTTAGTGAAC TTATTGATCG TCCTCGTTCT GAGTTGACAG AACTCGAACT TCAAAAGTTA GAAGAGTTCG AATTTGCCCA TGGACCCATG TCACTTATCC AGAATGCTGT TAATAACAAC ACACCCATAG TGATTTCATG TCGTAATAAC CACAAGTTGA TAGGCAAAGT GCGTGCTTTC GACAGACACT GTAATCTCAT TTTAGAAAAT GTCAAAGAGC TTTGGACGGA GACATCCAAG AACAACAAGG GCAAGGCTAC TAAGTCAATC TCGAGAGAAA GATTCATTTC CAAATTGTTT TTAAGAGGAG ATTCTATTGT GATCATATTG AAGGCATGA
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Protein sequence | FSELIDRPRS ELTELELQKL EEFEFAHGPM SLIQNAVNNN TPIVISCRNN HKLIGKVRAF DRHCNLILEN VKELWTETSK NNKGKATKSI SRERFISKLF LRGDSIVIIL KA
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