Gene PICST_60825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60825 
Symbol 
ID4839560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1213878 
End bp1214216 
Gene Length339 bp 
Protein Length112 aa 
Translation table12 
GC content39% 
IMG OID640390875 
Productpredicted protein 
Protein accessionXP_001385240 
Protein GI126137433 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0777781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.500519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTTAGTGAAC TTATTGATCG TCCTCGTTCT GAGTTGACAG AACTCGAACT TCAAAAGTTA 
GAAGAGTTCG AATTTGCCCA TGGACCCATG TCACTTATCC AGAATGCTGT TAATAACAAC
ACACCCATAG TGATTTCATG TCGTAATAAC CACAAGTTGA TAGGCAAAGT GCGTGCTTTC
GACAGACACT GTAATCTCAT TTTAGAAAAT GTCAAAGAGC TTTGGACGGA GACATCCAAG
AACAACAAGG GCAAGGCTAC TAAGTCAATC TCGAGAGAAA GATTCATTTC CAAATTGTTT
TTAAGAGGAG ATTCTATTGT GATCATATTG AAGGCATGA
 
Protein sequence
FSELIDRPRS ELTELELQKL EEFEFAHGPM SLIQNAVNNN TPIVISCRNN HKLIGKVRAF 
DRHCNLILEN VKELWTETSK NNKGKATKSI SRERFISKLF LRGDSIVIIL KA