| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60715 |
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| Symbol | |
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| ID | 4839163 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1615745 |
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| End bp | 1620913 |
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| Gene Length | 5169 bp |
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| Protein Length | 1671 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390478 |
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| Product | predicted protein |
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| Protein accession | XP_001385312 |
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| Protein GI | 150865907 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.76462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.210196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA ACGTCCTGGT GTCGCTGGAG TTGGAACAGC GCCAGAACGA TGAGCTCAAT
TCTATAGCCT CCATATACGG AGACATGTTC CACGACATTA CGCCTAAGGG CTTGGTGTGG
AACAAGAAAC CGTGTCCCCA TTTCCAAATC AACATTGAGT CACATGTAAA CCCAGATCGA
CCAGTGCTAT CTATGACACT AGACATAGAG TTCACTCAGA CATATCCGCT ATCGCCGCCG
CTTGTCAAGA TTTTGCATCC GAAGAATATC CTCAACAAAA AACTTCTGGT TATAGAATGC
AAAATCAAGG AGCTTATCAA AGAGTATCCG GAGGAAGAAG TTCTGTTCAC GATTATCTCA
GAAGTGATTA TTCTCTGCGA CGAATTCCAG CTGACGGCGG AAAAGGTACT ATCCCTCGAA
GAAGAGAGTG CGCTCAGGCT CAAAAATAAG AAAATCGAGC TCGAGAAACA AGAAGCCAAA
CGTAAAGCTG AACAGGAGTT GGCCCGAAAG AAACAAAACG AAGAACTCAA CCAGCAAATC
AAACTCATCA GGGGTGAATA CTATGACTCC AACTCCATTA CGGTGCCAAC AGACCAGAAA
GAACAAGACC TCATACCTTC CAACGATAAA GACCAGTATT TCATATTTGA AAATGCAATT
GTAGGCGAGT TCCCGGCAGC CTCCAGAACA AAACTTAAGT TCAAGTTCAA AGCAGTGCTG
GGATTCATAA AATACGGCAA AAGAGACTTG TTATCTACAG CTGGAAACCA GTATATAGTC
AAGCCATATC TTACGCCTGA TCTTCAAACG AAAATCGATG CTAAAGGTAC GGAATTATCG
TACTTGTTAA CTGAAATAAA GTTGGAAAAC CCCTACTGGA ACTCAGAACA AGGCAAAGAT
GAAATCCGTG ATCTCGAGCA CGAGTTACAA ATGATCAGAG ACATCAGCAA CGATAACATC
ATTAAATTGT ATGGGTTTCA GTTCGATAAG TGCACTGGAG GCTGGAAATT GAGATTGTTA
ACTGAGTTCT CCTCTGCAAG TGAATCTCTT CACGATATCC TTCCAACGGC TGAATTTATC
AATTGGGCTC TTGCAAGAGC ATGGCTCATT CAGATTCTTC CAGCGTTGGA AAGTTTGCAC
AACTTGGGCT TCATACACAA GCTGTTGTGT CCTTTGACTA TTTTGGTGTT CCAATCGCCT
GTTGACTACT ATTATCAAAA TTCAGTGAAT GAGAACCTCA ACTCCTACCA AGATGTTGAT
AGTGTTCAAC AACCAGATTC CAGCCATGCC AAAGTGCTCA AACTCAGTCA CCCTTCTTAT
GGCTACAAGA TTTTGAAGAT GTTGAATTCG CACCCTAATG ATCCTACCAA TAATCTTATG
GACTTCTACC AGATCATAAT TCCTGAAAAC TGGATAGCTC CAGAATTGAA GCACTCTGGA
GTCCACAATC AAAGAACTGA TGTTTGGGAT TTGGGAGTAC TTTTCATCAG AGTGATGATC
AGTTATAATG CATTGAAGAC AACATTCCAC ACTCCAGAAG AATTCCACGA CAAGTTCTCA
GACGACGACT ATCCTGGTGC TGAAGTGTTC GCTTCACTGG TGTATGATAT GCTTTCCAAG
ATGATACAGC CAAAAATGTC AAAAAGACCT ACTCCGTTGG AATTAAATGC CGTCAAGTTT
TTGAGAGATG GCCCTGTAGT AACTATATCT CATCCCTTTA TTGGTAACAC GTCTATGAAG
TACAATTTGC TGACAAATAA CCAGTCCAGT AAAAGCTCAC CAATTGTAGT GAAGGATGCT
GTTTCTAGAT ACGACAGCAA TACGGAAGTT AGTAAAAGAA TGCCCGGTCA TGCCAAAAGA
AGATTTTCCA ATACTCATGG TGAACTGCTT CTGGGATCCT TTATGAAGTC GGGAACTCAA
AGAAACATTG GACGCTATGA AAGGGACTTT GAAGAAATTG GAAAGCTTGG TAAGGGAGGG
TTTGGTGAAG TTGTCAAGGC CAGAAACAGA TTGGAAGGTA CATTTTACGC CATTAAGAAA
ATTAAGCACA AATCCAGTAA ATTGGACTCA TTATTGAGTG AAGTTCTCTC CCTTGCCAGA
CTCAATCACC AGTACATTGT TAGATATTAT GGGACTTGGG TTGAAGAACT TCCTGATTCG
ACCAATGCCT CTTCTGTTGT TACCGATGAT GGGACGAAAA GCGGTGATGA TGTGGCTTCA
GAAAGTGAAA CAGAAGATGA CTTTGAAAGT CCACTTAACG CCAGATCTAC TTCCTTTTTG
CTAGCAGATA ATTCGTTCCA AGTAGATTAT ATGTCAAATT CATTTGATCC TGGTATTGAA
TTCGGGTATT CAAGTGATGA AGAAGACGAT TTGGATGATC GAATTGAGTT TGCCAATTCC
ACAGAGGAAC TGACTGACAA TGCCTTAGTA ACTGAAAGTG AAGATGAAGA TTCACTAGAT
TTAAGTAAAC ATGAGATAAA GATCAAAGTG GATGTCCTTC CTAAGTTGGC AGAGCAAACG
AAGTCAATAT TATATATTCA AATGGAGTTC TGTGAGAACA ACACATTGCT CAACTTGATA
GATCAAGGTT TGCCCGGTAA TTCCAATGAG TACTGGAGGC TTTTCCGTCA GTTGCTTGAA
GCAGTATCGT ATATTCACCG AGAAGGTTTC ATCCATAGAG ACTTGAAACC TACCAATATC
TTTATTGACA GATCTAATAA CGTCAAGGTC GGAGATTTCG GTTTGGCAAA GAATTCTCAA
TTCTCATCTA TTGTACTGAC AAACAATCAG GTCACATCTA ATTCCAAGAA TGGAGATTTA
TCCACTGTGG TTGGTACTCT TTTCTATACT GCTAATGAAG TCGCAACTGG TTCATATGAT
GAAAAGGTGG ATATGTATTC TTTGGGTATC ATTTTCTTTG AGATGTGCTA TCCTTTGGCA
ACGGGAATGG AAAGAGCCAG AACTTTGAAT GACTTGAGAT TGGTTTCGGT TGAATTTCCT
TCTAACTTTG TCGATCTGAA ATACAAGACT GAAAAGAAGA TTATCCGGTT GCTTCTTGAT
CACGATCCTA AGTTGCGTAT TGGAGCTGCT GAATTGTTGC AGAGTGGACT TTTGCCAGTT
GAACATCAGG ATGTAGTTAT CAAAGAGGCA TTGAAATCGT TGGCAGATCC TGCTTCCCCT
TGGCAACAAC AAGTACGTGA GACCTTATTC AACCAACCTT ATCTGTTAGC AAGAGACTTG
ATGTTTGATT CGTCCAACAA AGTTTCTCAT TTCCATAACT TGGAAGGCTC TGCTAGCGAT
TACTTGATCT TCAACCGAAT CATCTTGGAA ATGTACCGAA TCTTCAGAAG ACACGGAGCA
ATAGAAGATT TCAATGCCAA TGTTTTAGCA CCCAAGGCAC CCTTCCAATC ACGAGATCTA
GTATATGAGG TCTTGGATAA GAATGGATCA GTTTTGACCT TGCCATATGA TCTAACCCTT
ACTACAGCTA GAATTTTAAG TAAGGCTGAT ATGTCCATAT CGAAAACATA TAGACACGAT
TTTGTCTACA GACCCAACGT TAGAGGTACT GGAGTCCCAG ACAAGTACAG TGCGGTCAAA
TTTGATATAA CTTCCCATGA CGCTTCAAGC AGAATTGTTA ACGATGCGGA ATGCCTAAAA
GTAGTAGATG AGATCATTCA AGCTTTTCCT TGTTTCCATG CAAAAAGCTC GTCAGCCATC
ATTGTCGTGA ACCACAACGA TATTTTGGAA GCTGTGACTA CGTTTGCTTT TGGAAGTGTT
CGTATAGACG ACAAGAAAAG ACTAGAGGTA TTTGGAATTC TTTCACAGCT TGGATTAGAT
AAGGATGCGG ATGAAATTAA GCGTTACCTC CGTGAGGATC TTAAGGTTCC ACATACTGTT
ACTTACGATT TGGTAGATGG ATTTGATTTT ACTTTGGAAG TCGATAAGGC TCGCCAAAAG
TTTCAAAAGA TCATGAAAGA CTCTCCATTA TTGGGCAAGA TTGAAAGGGC TCTCCAATAT
CTTCTTGATG TTGTTGCCGT TCTCAAGAAG TTTGGCGTGA AAAGTCCTGT CTACTTTAAT
CCTCTTAGCA ATTACAACAG CAAATACTAT TCGCATGGCA TTTTGTTCCA GGGAATATTC
AAGATCGAGA AGAACAGAAG ATATTCACGT ATTGTAACAG GTGGAAGATA TGATTCCTTG
ATTGCATCAT TTGTGAATAA AGATATTGCA AAGTCCAATA CTCCTTTTGC TGTTGGTTTC
ACATTAACTA CTACTTTCAC TTTTGTTCTA ATGAAGAAAC TTTTACATCG CAAGGTCAAG
AACCAGGAGT TCAATCATCA GAAGTGGAGA GGTGTAAGAT GTGATGTTAT TATTACGTCT
CCCAGCGCTG CATACATGGA CCAGTCTATC TATGAAATAG CAAAAGAGTT GTGGGCCCAC
AACATAAACT GCGATACATT TGTTTTCTCT TCTCAAGAAG AGCTTTCTCA TAAAGTTCAG
ACTGATGGAG CCAATTGGAT AGTTGTAACT AAACAACCAA ATACTCTCCA AAAGCGTAAG
TCCAAAAAGG CAGGGAGTAG AAATTTCAAA CCTTTGAGAG TAAAGACTTT GCACCCTAAC
AAAGAGGTCG ATTTGGGGTA CGATGAGCTT GTTGATTATC TTGAGTCGGA GATCGAAGAA
CGGAACACTG AATTTGAGGT TGAATGCGGA GACAACAGTA ATGATCATGG TAAGGCACCT
GAAGATAACA ATAATCATAT GGAGTCAGAC ACTTCTCACC ATGAGCTCAA CCCTTTGTTT
TCGGTTGATA TTGAACAGAA AGCTATTGTT GTTCCCAACG AAGCTCCCAG AGGTAGAAAG
AATAACAAGA GAGAAAAGTG GGAGTTGGAA AATGACTCGA AGATAGCTTC AGCCCAGGCA
CTCAAGGATT TGGCGACTTC ACCTGTTATC ACGGTAGATG CCAGAGATGA GGTTCTTGAC
ATGATAGCTA TCACTTCGAT TCTGCAACAG GAAGAATGGT TGAGAAAGGT AATATTTTCC
AATTTGCCTC GTAGTTATGC TATTAACATC CACAATTCGT TATCAAAAGA GGCCAGTAAG
GGCCACAGAT GGGCCGTAAT ATACTCTCCC AAAACACAGA AGACGAACAT CGTTGATTTG
CAACGATGA
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| Protein sequence | MPNNVSVSSE LEQRQNDELN SIASIYGDMF HDITPKGLVW NKKPCPHFQI NIESHVNPDR
PVLSMTLDIE FTQTYPLSPP LVKILHPKNI LNKKLSVIEC KIKELIKEYP EEEVSFTIIS
EVIILCDEFQ STAEKVLSLE EESALRLKNK KIELEKQEAK RKAEQELARK KQNEELNQQI
KLIRGEYYDS NSITVPTDQK EQDLIPSNDK DQYFIFENAI VGEFPAASRT KLKFKFKAVS
GFIKYGKRDL LSTAGNQYIV KPYLTPDLQT KIDAKGTELS YLLTEIKLEN PYWNSEQGKD
EIRDLEHELQ MIRDISNDNI IKLYGFQFDK CTGGWKLRLL TEFSSASESL HDILPTAEFI
NWALARAWLI QILPALESLH NLGFIHKSLC PLTILVVQQP DSSHAKVLKL SHPSYGYKIL
KMLNSHPNDP TNNLMDFYQI IIPENWIAPE LKHSGVHNQR TDVWDLGVLF IRVMISYNAL
KTTFHTPEEF HDKFSDDDYP GAEVFASSVY DMLSKMIQPK MSKRPTPLEL NAVKFLRDGP
VVTISHPFIG NTSMKYNLST NNQSISKRMP GHAKRRFSNT HGESLSGSFM KSGTQRNIGR
YERDFEEIGK LGKGGFGEVV KARNRLEGTF YAIKKIKHKS SKLDSLLSEV LSLARLNHQY
IVRYYGTWVE ELPDSTNASS VVTDDGTKSG DDVASESETE DDFESPLNAR STSFLLADNS
FQVDYMSNSF DPGIEFGYSS DEEDDLDDRI EFANSTEEST DNALVTESED EDSLDLSKHE
IKIKVDVLPK LAEQTKSILY IQMEFCENNT LLNLIDQGLP GNSNEYWRLF RQLLEAVSYI
HREGFIHRDL KPTNIFIDRS NNVKVGDFGL AKNSQFSSIV STNNQVTSNS KNGDLSTVVG
TLFYTANEVA TGSYDEKVDM YSLGIIFFEM CYPLATGMER ARTLNDLRLV SVEFPSNFVD
SKYKTEKKII RLLLDHDPKL RIGAAELLQS GLLPVEHQDV VIKEALKSLA DPASPWQQQV
RETLFNQPYS LARDLMFDSS NKVSHFHNLE GSASDYLIFN RIILEMYRIF RRHGAIEDFN
ANVLAPKAPF QSRDLVYEVL DKNGSVLTLP YDLTLTTARI LSKADMSISK TYRHDFVYRP
NVRGTGVPDK YSAVKFDITS HDASSRIVND AECLKVVDEI IQAFPCFHAK SSSAIIVVNH
NDILEAVTTF AFGSVRIDDK KRLEVFGILS QLGLDKDADE IKRYLREDLK VPHTVTYDLV
DGFDFTLEVD KARQKFQKIM KDSPLLGKIE RALQYLLDVV AVLKKFGVKS PVYFNPLSNY
NSKYYSHGIL FQGIFKIEKN RRYSRIVTGG RYDSLIASFV NKDIAKSNTP FAVGFTLTTT
FTFVLMKKLL HRKVKNQEFN HQKWRGVRCD VIITSPSAAY MDQSIYEIAK ELWAHNINCD
TFVFSSQEEL SHKVQTDGAN WIVVTKQPNT LQKRNRNFKP LRVKTLHPNK EVDLGYDELV
DYLESEIEER NTEFEVECGD NSNDHGKAPE DNNNHMESDT SHHELNPLFS VDIEQKAIVV
PNEAPRGRKN NKREKWELEN DSKIASAQAL KDLATSPVIT VDARDEVLDM IAITSISQQE
EWLRKVIFSN LPRSYAINIH NSLSKEASKG HRWAVIYSPK TQKTNIVDLQ R
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