Gene PICST_60552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60552 
SymbolAZR3 
ID4839316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1720360 
End bp1721937 
Gene Length1578 bp 
Protein Length525 aa 
Translation table12 
GC content38% 
IMG OID640390631 
ProductAzole resistance protein 1 
Protein accessionXP_001385020 
Protein GI150865695 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GGAATTCCTT TGATTTTGTG CACAATATCA ATTATCTTAT CCATATTTCT TACGGCAATT 
GATCAAACGG TTGTAATAAC TGCCTTGGCA GGAATAGAGG AAGCTTTTGG TGGTGCTTCC
CAAATTGGGT GGTCAACAGC AGGTTATGTA CTTCCCATGG CAGTGTTGGC ACTTTTCTGG
GGCCGTTTCG GTTTAGTAAT GGGAAGAAAG AGTTCTGTTT TAATATCCAT ATTCTTTTTC
GAAGTTGGGT CTTTAATATG TGCCCTATCT AAGTCTATGG GCATGTTTAT TGGTGGAAGA
GTTATTACAG GCATTGGAGC CGGGGGTATA CAAACAAATG TCTTCATGAT AAGTTCAGAA
ATCACGCCTC TAAATCAAAG AGGTATCATA ATAGCCTTTG TGACTATGTC CTTAATTCCT
GCTGCTGTCA TAGGACCGGT AATAGGAGGT CTTTTTACTA GCTCCAAGAC CTTGACTTGG
CGTTGGTGTT TCTACATAAA CTTACCTTTT GGCGGGGTTG CTGCACTATT TCTACTGCTA
CTTTATAAAC CTAAGAACGA CAAGTCAAGG TTTATTTGGA ACTGGAACAA GACAATATTC
AAAAGATTGG TTAATACATT TGATCTTGTA GGAGTTCTTC TAGTCGGGAT ATCTTTAGTT
TTATTTCTTG TTGGTTGTTC TTTAGGGGGT ACTGGTTTAA ATGGTTTCAA TAAACCAGTT
ACGATATGTT TCACTATAAT TGGAGGTGTA CTTTTCCTTT GTTTCATATA CTATGAATTC
TATTGCTACA AAGTCAACCA GGAAATGCAC TACTATCCAA TGCTTCCTAA AGAATTAATT
TTCAAGAGAC AAGTCTTGGC TCCGGGACTC ATAATGTTGT TGTCGAATAT GGTATTTAAT
GGCTCGAGCA TTTACATTTC AATCTATTTT GAAAATCTAT TGGGTAACTC TCCTTCGAGA
ACTGGAGTTC ATCTTTTGCC AATGATATTG CCTACCATAT TAACTACTAT GATTTCTGGG
CTAATTTGTA GCAAAGTCGG TATTGTCAAA CCTGTGTTAA TTTTTGGATC TATTTGCGGA
GTCATTAGCA GTGGATTGAT TACTATGCTT AATTATCATT CTAGTGATGG GGAAAAGATA
GGGTTTCTAT TTCTTGTTGG ATTTTCCTTT GGTTTCTTCA ACCAAGCAAG TATGATTGCT
GCTCAGCTAT CTGTATCTGA AGATCAAACA GATTATACAT TGATAATTAC ATCATTTACT
GCTTTCATGA GATCTTTTGG AGCCTCATTG GGTGGTATAG TACTTACTTC AATTTATTCC
AACACAGTCA ATAAGGAACT ACAGAAGTAT CCCCAATTTA GAGAGGAGAC CGTTGACCAA
ATCCTAAAAA ATGGAAGCTT GCAAGGATTT GATCAGCATG AAGCCTCTAT CCTTATCAAT
GCATTGTCGA TTGGGCTCAA ATGGGTTTTT CACTCAATTC TCATCTTATC CGTCTCTTGT
CTCTTCATTT CCTTTACTAC TTCCAACGCC AGGGTTCCTC AAAAGAAAAA GGAAGATACT
GATATCGTAG AAGCGTAA
 
Protein sequence
GIPLILCTIS IILSIFLTAI DQTVVITALA GIEEAFGGAS QIGWSTAGYV LPMAVLALFW 
GRFGLVMGRK SSVLISIFFF EVGSLICALS KSMGMFIGGR VITGIGAGGI QTNVFMISSE
ITPLNQRGII IAFVTMSLIP AAVIGPVIGG LFTSSKTLTW RWCFYINLPF GGVAALFLSL
LYKPKNDKSR FIWNWNKTIF KRLVNTFDLV GVLLVGISLV LFLVGCSLGG TGLNGFNKPV
TICFTIIGGV LFLCFIYYEF YCYKVNQEMH YYPMLPKELI FKRQVLAPGL IMLLSNMVFN
GSSIYISIYF ENLLGNSPSR TGVHLLPMIL PTILTTMISG LICSKVGIVK PVLIFGSICG
VISSGLITML NYHSSDGEKI GFLFLVGFSF GFFNQASMIA AQLSVSEDQT DYTLIITSFT
AFMRSFGASL GGIVLTSIYS NTVNKELQKY PQFREETVDQ ILKNGSLQGF DQHEASILIN
ALSIGLKWVF HSILILSVSC LFISFTTSNA RVPQKKKEDT DIVEA