| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60537 |
|---|
| Symbol | RCF3 |
|---|
| ID | 4839271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 760467 |
|---|
| End bp | 761435 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640390586 |
|---|
| Product | DNA replication factor C |
|---|
| Protein accession | XP_001385155 |
|---|
| Protein GI | 126137263 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0632786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.140839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TACAGGGTTG AAAAGTACCG TCCATCTACC TTAGACGAGG TGTACGGCCA AGAAGAGATT
GTCCAGACAG TTAAGAAATT TGCCCATGAA AACAGATTGC CCCATTTGCT ATTCTATGGA
CCTCCTGGTA CTGGGAAAAC TTCTACTATC ATAGCGTTGG CGCGCGAGAT CTACGGCACC
AACTACAAGA ACATGGTTCT TGAGCTCAAT GCATCGGACG ACAGAGGTAT TGACGTAGTT
AGAAACCAGA TCAAGAACTT TGCCTCCACC ATGCAGATTT TTTCCAGAGG TTTCAAGTTG
ATTATCTTGG ATGAAGCCGA TGCCATGACA GCTGTGGCCC AAAACTCGTT GAGAAGAATC
ATCGAGAAGT ATACCAAAAA CACCCGTTTC TGCATTCTTG CCAATTATGC TCACAAACTC
AATCCGGCAT TGCTTTCTAG ATGTACGCGT TTCCGCTTCC ATCCCATCTC TGAGGATGCC
ATTAAAGATA GAATCCAGAA CGTCATCATC AAAGAAAGTT TGAAAATCGA TCCTCCGGCT
GAGGCCGCAT TGCTTAAGCT TTCGAAGGGA GACATGAGGA GAGCATTGAA TGTTTTACAA
GCGTGCAAGT CAGCCGTGGA CTCTGCCGAT GAAGAGATTA CTGAAGATAT GATCTATGAA
TGCGTAGGCG CACCACATCC GAAAGATATA GAAGTAGTTC TAGACTCCAT TTTGAAGGAC
GACTGGACTA CGGCTTACAT AACCATTAAC AAGTACAAAA CCACTAAAGG TTTGGCACTC
ATAGACTTGA TTTCAGGCTT CATCGAAATC TTGAATCAAT ACAAGTTGCA GGGCAAGACA
AGAATCGAAA TTTTCAAGGG TCTAAGCGAG ATAGAGTACG GAATATCCAG AGGAGGAAAC
GATAAGATCC AGAGCAGTGC TATCATCGGA GTGATAAAGG ATGCGTTGGA ATACGAAGCA
GTAGCTTAG
|
|---|
| Protein sequence | YRVEKYRPST LDEVYGQEEI VQTVKKFAHE NRLPHLLFYG PPGTGKTSTI IALAREIYGT
NYKNMVLELN ASDDRGIDVV RNQIKNFAST MQIFSRGFKL IILDEADAMT AVAQNSLRRI
IEKYTKNTRF CILANYAHKL NPALLSRCTR FRFHPISEDA IKDRIQNVII KESLKIDPPA
EAALLKLSKG DMRRALNVLQ ACKSAVDSAD EEITEDMIYE CVGAPHPKDI EVVLDSILKD
DWTTAYITIN KYKTTKGLAL IDLISGFIEI LNQYKLQGKT RIEIFKGLSE IEYGISRGGN
DKIQSSAIIG VIKDALEYEA VA
|
|---|
| |