Gene PICST_60535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60535 
Symbol 
ID4839350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1537985 
End bp1538875 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content48% 
IMG OID640390665 
Productpredicted protein 
Protein accessionXP_001384989 
Protein GI150865675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.466164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGG TCTCAATTGC TGTCATTGGT CTCAACGGTT TCTTAGGTAA GCCTGTTGTG 
GATGCCATTG AATCTGGAAA GTTCGACGAC AAGATCCAGT TCCCAATCAA GGCTGTTACC
AGAAAGGAAA AGCCTTCCAC TTCCAAAATT GAGTACGTTG TTGCTCAGTT GGACGACGAA
CACATCGACG ATGTCGCTGC CAAGTTGAAG GGCACTGATG TCATTATCGA GTTGGTCGCT
CCAAACCCAC AATTGTTCCT GACTCTCGAG AAGGTCGCAG CCAAGGTCCA GCCAAAGTTG
TACATTCCTT CGCAATTTGG TGTTGACATT CTCCAAATCG ATGCCTATGC TCGTGGATTC
TTGGCCATCA AGACTGAACA CTCGACCAAG CTCAGAGAAA GTGGTTTGAA GGTCGTTGAT
TTCGTCACCG GTTTCTTCGC TGAACCAGGT GCATTCCTCT ACGAAATTGT CGGAGTTGCT
GGTATCGATC CAGCTACCAA GACTATCACC CAGAGAGGCT CTCCAGACTC CAAGATCTCT
ATCACCAAGT TGCCTGATAT CGGATACTCC TTGGTTTCTT TGCTGACCCA GGACCCAGCC
ACTCTTCCAG ATACCGTTAG AATCTCATCT CAAGTCATCA CCCTCCAAGA TGTCATTGAC
AAGTACGAAG CCAATCACGA CGTCAAGTTG TCTGTGGTTA AGACCATCTC CAAGGAAGAC
ACCTTGAAGG ACTTCCAGGA CAGATTGGCT GCTGGCTTCA ACTTTGCCGA CTTCTTCTTC
TACCTTCAAG CTGTGGCTAC CCAAGGTCTT GACAAGGGTG TTTTGTTCTC GGAAGTCCAC
AACGAGTTGG TCAACCCAGG TGAATCTTTG TTCAAATGGG GTAAGTTCTA A
 
Protein sequence
MSKVSIAVIG LNGFLGKPVV DAIESGKFDD KIQFPIKAVT RKEKPSTSKI EYVVAQLDDE 
HIDDVAAKLK GTDVIIELVA PNPQLFSTLE KVAAKVQPKL YIPSQFGVDI LQIDAYARGF
LAIKTEHSTK LRESGLKVVD FVTGFFAEPG AFLYEIVGVA GIDPATKTIT QRGSPDSKIS
ITKLPDIGYS LVSLSTQDPA TLPDTVRISS QVITLQDVID KYEANHDVKL SVVKTISKED
TLKDFQDRLA AGFNFADFFF YLQAVATQGL DKGVLFSEVH NELVNPGESL FKWGKF