Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60535 |
Symbol | |
ID | 4839350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1537985 |
End bp | 1538875 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640390665 |
Product | predicted protein |
Protein accession | XP_001384989 |
Protein GI | 150865675 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.466164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGG TCTCAATTGC TGTCATTGGT CTCAACGGTT TCTTAGGTAA GCCTGTTGTG GATGCCATTG AATCTGGAAA GTTCGACGAC AAGATCCAGT TCCCAATCAA GGCTGTTACC AGAAAGGAAA AGCCTTCCAC TTCCAAAATT GAGTACGTTG TTGCTCAGTT GGACGACGAA CACATCGACG ATGTCGCTGC CAAGTTGAAG GGCACTGATG TCATTATCGA GTTGGTCGCT CCAAACCCAC AATTGTTCCT GACTCTCGAG AAGGTCGCAG CCAAGGTCCA GCCAAAGTTG TACATTCCTT CGCAATTTGG TGTTGACATT CTCCAAATCG ATGCCTATGC TCGTGGATTC TTGGCCATCA AGACTGAACA CTCGACCAAG CTCAGAGAAA GTGGTTTGAA GGTCGTTGAT TTCGTCACCG GTTTCTTCGC TGAACCAGGT GCATTCCTCT ACGAAATTGT CGGAGTTGCT GGTATCGATC CAGCTACCAA GACTATCACC CAGAGAGGCT CTCCAGACTC CAAGATCTCT ATCACCAAGT TGCCTGATAT CGGATACTCC TTGGTTTCTT TGCTGACCCA GGACCCAGCC ACTCTTCCAG ATACCGTTAG AATCTCATCT CAAGTCATCA CCCTCCAAGA TGTCATTGAC AAGTACGAAG CCAATCACGA CGTCAAGTTG TCTGTGGTTA AGACCATCTC CAAGGAAGAC ACCTTGAAGG ACTTCCAGGA CAGATTGGCT GCTGGCTTCA ACTTTGCCGA CTTCTTCTTC TACCTTCAAG CTGTGGCTAC CCAAGGTCTT GACAAGGGTG TTTTGTTCTC GGAAGTCCAC AACGAGTTGG TCAACCCAGG TGAATCTTTG TTCAAATGGG GTAAGTTCTA A
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Protein sequence | MSKVSIAVIG LNGFLGKPVV DAIESGKFDD KIQFPIKAVT RKEKPSTSKI EYVVAQLDDE HIDDVAAKLK GTDVIIELVA PNPQLFSTLE KVAAKVQPKL YIPSQFGVDI LQIDAYARGF LAIKTEHSTK LRESGLKVVD FVTGFFAEPG AFLYEIVGVA GIDPATKTIT QRGSPDSKIS ITKLPDIGYS LVSLSTQDPA TLPDTVRISS QVITLQDVID KYEANHDVKL SVVKTISKED TLKDFQDRLA AGFNFADFFF YLQAVATQGL DKGVLFSEVH NELVNPGESL FKWGKF
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