Gene PICST_60459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60459 
Symbol 
ID4839348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1534248 
End bp1535138 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content41% 
IMG OID640390663 
Productpredicted protein 
Protein accessionXP_001384987 
Protein GI150865673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.185541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAG TCTCAGTCGC CTTTTTCGGA ATCACTGGAT TCTTGGGAAA CCCAATCATC 
GAAGCTTTTG AAACTGGTAA GTTCGACGAC AAGATCGAAC TTCCCATCAA GGTTGTAACC
AGAAAGGAGT TGCCATCCAC CGACAGAATT CAATATATTG TTGGAAACTT GGACGATGAA
CTGGTTGATA GTTTGGCACA GAAATTGGAT GGTACTGATG TCATTGTCGA GTTGCTTGCT
GTGAACCCTG CTTTATTCAA AATCGTCGAG AAGATTGTTC AGAAGGTTAG GCCAAAGTTG
TTCATTCCTT CCGAATTCGG TGTTGATATT GATCAAGTCA ACACATATGT CCCTGGATTC
TGGAGTGTCA AGTCGGATCA CGTTGAACAT GTAAGAGAGT CTGGAATTAA GACTGTTAGC
GTTGTCACTG CCGAGTTTGC AGTTCCAGGT AGTTTCTTAT ATGAGTGGGT TGCACAAGTT
GGAATTGACG TAAAGGAAAA GACCATCACC CATTTTGGTG ACCCAAACAC AAAGATTACA
ATCTGTAAAT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGATTACTTT GGATCCTCAA
ACTATTCCCG ACACCGTTAG AATTCAGAGT GACGAAGTTA CCTTCCAGGA TGTTATTGAC
AGATATGTTC AAACTCACAA CGTTGAATTG AAGGTAGTCA AGACGATCCC TAAGGAACAA
GTGGCCAAGG ACATTTTAAC CAGATTTGAA AGTGGTTTCA GTCCAGATGA TATCTTTTTC
TATTTGCAAG CAATTGCATC TCAGGGTACC GATAAAGGTA TGCACTTTAC TGAGATTCAC
AACGAATTGG TCAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
 
Protein sequence
MSKVSVAFFG ITGFLGNPII EAFETGKFDD KIELPIKVVT RKELPSTDRI QYIVGNLDDE 
SVDSLAQKLD GTDVIVELLA VNPALFKIVE KIVQKVRPKL FIPSEFGVDI DQVNTYVPGF
WSVKSDHVEH VRESGIKTVS VVTAEFAVPG SFLYEWVAQV GIDVKEKTIT HFGDPNTKIT
ICKLADIANS VLSLITLDPQ TIPDTVRIQS DEVTFQDVID RYVQTHNVEL KVVKTIPKEQ
VAKDILTRFE SGFSPDDIFF YLQAIASQGT DKGMHFTEIH NELVNPGESL WKWEKF