Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60459 |
Symbol | |
ID | 4839348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1534248 |
End bp | 1535138 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390663 |
Product | predicted protein |
Protein accession | XP_001384987 |
Protein GI | 150865673 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.185541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAG TCTCAGTCGC CTTTTTCGGA ATCACTGGAT TCTTGGGAAA CCCAATCATC GAAGCTTTTG AAACTGGTAA GTTCGACGAC AAGATCGAAC TTCCCATCAA GGTTGTAACC AGAAAGGAGT TGCCATCCAC CGACAGAATT CAATATATTG TTGGAAACTT GGACGATGAA CTGGTTGATA GTTTGGCACA GAAATTGGAT GGTACTGATG TCATTGTCGA GTTGCTTGCT GTGAACCCTG CTTTATTCAA AATCGTCGAG AAGATTGTTC AGAAGGTTAG GCCAAAGTTG TTCATTCCTT CCGAATTCGG TGTTGATATT GATCAAGTCA ACACATATGT CCCTGGATTC TGGAGTGTCA AGTCGGATCA CGTTGAACAT GTAAGAGAGT CTGGAATTAA GACTGTTAGC GTTGTCACTG CCGAGTTTGC AGTTCCAGGT AGTTTCTTAT ATGAGTGGGT TGCACAAGTT GGAATTGACG TAAAGGAAAA GACCATCACC CATTTTGGTG ACCCAAACAC AAAGATTACA ATCTGTAAAT TGGCAGACAT TGCTAATTCT GTTCTCTCTT TGATTACTTT GGATCCTCAA ACTATTCCCG ACACCGTTAG AATTCAGAGT GACGAAGTTA CCTTCCAGGA TGTTATTGAC AGATATGTTC AAACTCACAA CGTTGAATTG AAGGTAGTCA AGACGATCCC TAAGGAACAA GTGGCCAAGG ACATTTTAAC CAGATTTGAA AGTGGTTTCA GTCCAGATGA TATCTTTTTC TATTTGCAAG CAATTGCATC TCAGGGTACC GATAAAGGTA TGCACTTTAC TGAGATTCAC AACGAATTGG TCAACCCAGG AGAATCTCTC TGGAAGTGGG AGAAGTTTTA G
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Protein sequence | MSKVSVAFFG ITGFLGNPII EAFETGKFDD KIELPIKVVT RKELPSTDRI QYIVGNLDDE SVDSLAQKLD GTDVIVELLA VNPALFKIVE KIVQKVRPKL FIPSEFGVDI DQVNTYVPGF WSVKSDHVEH VRESGIKTVS VVTAEFAVPG SFLYEWVAQV GIDVKEKTIT HFGDPNTKIT ICKLADIANS VLSLITLDPQ TIPDTVRIQS DEVTFQDVID RYVQTHNVEL KVVKTIPKEQ VAKDILTRFE SGFSPDDIFF YLQAIASQGT DKGMHFTEIH NELVNPGESL WKWEKF
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