Gene PICST_60430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60430 
Symbol 
ID4839498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1311596 
End bp1312360 
Gene Length765 bp 
Protein Length254 aa 
Translation table12 
GC content42% 
IMG OID640390813 
Productpredicted protein 
Protein accessionXP_001384942 
Protein GI126136837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.103561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA TGAAAGTTCA AGTAGAGGTG GATCCTACCG AGGACACCGA GTGGAACGAT 
ATTTTGAGAA GTCATGGAAT AATACCGGAA AGACCTCCTT CTCCGACTGC AGAATTGGAG
GCTGCGCTCG AAGAAGCTGT AAGAAAACAG CATGAAAACA GACTCGAATC CAAGGACTTG
GATGAGCTCG ATGGCCTCGA AGATGAAGAA GACGAGGAAT TCTTGAATTT CTACAAAAAT
AAGAGAATGG CTGAGTTACA GAAGTTGGCA GAGAAAAAGA AGTTTGGCTC TGTATATCCT
ATCGCAAAGA ACGAATACGA AGATGAAGTG ACAAAAGCTT CCAATGATTC GTTCGTATTG
GTGCATATGT CATTGCAATC GGCATTACAG AGCAGATTAT TGTCGACTTT GTTAAGTACT
GTTGCTCGTA AGTTTCCAGA GATCAAAATC TGTGATATTG AAGCTACCAG ATGTATTGAG
AATTATCCCG AATCCAACTG TCCTACATTT ATTATATATC ACAAGACCAA TGTGATTAAA
CAGTATATCA CGTTGACTCA ATTGGGAGGC AACGACGCTA AGTTGAAGGA CATTGAGCGT
GTGTTGGTAG ACGTAGATGC TGTAGATGTC AATGACAAGA GACTCGATAT AAACCAGCAG
GACGAAGACT TGGAAGACGA GAGACGGATG CGTTTCACGA AGAAGTCAAT TAGGGGTCGA
CAAGAGTTTG ACAATGACGA CGACGACGAT GATTTCTACG ACTAA
 
Protein sequence
MNNMKVQVEV DPTEDTEWND ILRSHGIIPE RPPSPTAELE AALEEAVRKQ HENRLESKDL 
DELDGLEDEE DEEFLNFYKN KRMAELQKLA EKKKFGSVYP IAKNEYEDEV TKASNDSFVL
VHMSLQSALQ SRLLSTLLST VARKFPEIKI CDIEATRCIE NYPESNCPTF IIYHKTNVIK
QYITLTQLGG NDAKLKDIER VLVDVDAVDV NDKRLDINQQ DEDLEDERRM RFTKKSIRGR
QEFDNDDDDD DFYD