Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60430 |
Symbol | |
ID | 4839498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1311596 |
End bp | 1312360 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390813 |
Product | predicted protein |
Protein accession | XP_001384942 |
Protein GI | 126136837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.103561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA TGAAAGTTCA AGTAGAGGTG GATCCTACCG AGGACACCGA GTGGAACGAT ATTTTGAGAA GTCATGGAAT AATACCGGAA AGACCTCCTT CTCCGACTGC AGAATTGGAG GCTGCGCTCG AAGAAGCTGT AAGAAAACAG CATGAAAACA GACTCGAATC CAAGGACTTG GATGAGCTCG ATGGCCTCGA AGATGAAGAA GACGAGGAAT TCTTGAATTT CTACAAAAAT AAGAGAATGG CTGAGTTACA GAAGTTGGCA GAGAAAAAGA AGTTTGGCTC TGTATATCCT ATCGCAAAGA ACGAATACGA AGATGAAGTG ACAAAAGCTT CCAATGATTC GTTCGTATTG GTGCATATGT CATTGCAATC GGCATTACAG AGCAGATTAT TGTCGACTTT GTTAAGTACT GTTGCTCGTA AGTTTCCAGA GATCAAAATC TGTGATATTG AAGCTACCAG ATGTATTGAG AATTATCCCG AATCCAACTG TCCTACATTT ATTATATATC ACAAGACCAA TGTGATTAAA CAGTATATCA CGTTGACTCA ATTGGGAGGC AACGACGCTA AGTTGAAGGA CATTGAGCGT GTGTTGGTAG ACGTAGATGC TGTAGATGTC AATGACAAGA GACTCGATAT AAACCAGCAG GACGAAGACT TGGAAGACGA GAGACGGATG CGTTTCACGA AGAAGTCAAT TAGGGGTCGA CAAGAGTTTG ACAATGACGA CGACGACGAT GATTTCTACG ACTAA
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Protein sequence | MNNMKVQVEV DPTEDTEWND ILRSHGIIPE RPPSPTAELE AALEEAVRKQ HENRLESKDL DELDGLEDEE DEEFLNFYKN KRMAELQKLA EKKKFGSVYP IAKNEYEDEV TKASNDSFVL VHMSLQSALQ SRLLSTLLST VARKFPEIKI CDIEATRCIE NYPESNCPTF IIYHKTNVIK QYITLTQLGG NDAKLKDIER VLVDVDAVDV NDKRLDINQQ DEDLEDERRM RFTKKSIRGR QEFDNDDDDD DFYD
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