Gene PICST_60409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60409 
SymbolRPO26 
ID4839485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp702935 
End bp703408 
Gene Length474 bp 
Protein Length157 aa 
Translation table12 
GC content46% 
IMG OID640390800 
Productsubunit common to RNA polymerases I, II, and III 
Protein accessionXP_001384801 
Protein GI126136555 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.7613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACT TTGAAGAGAA TGCATTCAAC GATGGCGCCG AAAACTTTGA CGACTTCGAC 
CAGCCGGACC ACTTCTCCGA AGATGACTTC CAGGAACCAG AAGGAGAAGC CAATGGTGAT
GCTACCATGA AGACAGCTGA CGGCAAGACG ATTATAAATG GGGGCTTCGG CCCTGATGAT
GCATCAGCAA ACCAACCAAG ACAAAAGACA GCTAAGGAAT TGGCTATTCC AAAAGAAAAG
AGAACCACAA CCCCATATAT GACCAAATAT GAGAGAGCTA GAGTGTTAGG TACAAGAGCT
TTACAAATCT CACTTAATGC TCCAGTATTG GTGGACATCG AAGGTGAAAC TGACCCATTA
CAAATTGCCA TGAAGGAGTT GGCCCAAAGA AAGATACCCT TGGTCATTAG AAGATACTTA
CCCGACGGTT CATACGAGGA CTGGGGCTGT GATGAGTTGA TTGTTGACCA TTGA
 
Protein sequence
MSDFEENAFN DGAENFDDFD QPDHFSEDDF QEPEGEANGD ATMKTADGKT IINGGFGPDD 
ASANQPRQKT AKELAIPKEK RTTTPYMTKY ERARVLGTRA LQISLNAPVL VDIEGETDPL
QIAMKELAQR KIPLVIRRYL PDGSYEDWGC DELIVDH