Gene PICST_60316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60316 
SymbolYHM1 
ID4839341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp432209 
End bp433114 
Gene Length906 bp 
Protein Length301 aa 
Translation table12 
GC content47% 
IMG OID640390656 
Producthigh copy suppressor of abf2 
Protein accessionXP_001384746 
Protein GI126136445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCAG CTGCCTCCAC TGACAAGAAA CAATCTGGTA TAGCCAGAGT ATTGGGCTCG 
GCATCAGCCG GAATCTGTGA GATTGCTGTC TTCCACCCAG TTGACACTAT CTCCAAGAGA
TTGATGTCTA ACCACGGAAA AGTCACTTCA GCAGCTCAGT TGAACACCGT CATTTTTAGA
GAACACGCCG AAAAGGCTTT GGGTAAGCGT CTTTTTACCT TGTTCCCAGG TTTGGGTTAT
GCTGCTTGCT ACAAGATCTT GCAAAGAGTC TACAAGTACG GTGGTCAGCC TTTTGCTAAC
GAGTTCTTGA CGAAGAACTT CAAGGACTCT TACGACTCGT GGTTCGGACC AAAAACCGGT
AAAGCATTGA TGTCTGCCAC CGCTGGTTCC TTGATTGGTA TCGGTGAAGT CGTCTTGTTG
CCATTGGATG TGTTGAAAAT CAAGCGTCAA ACAAACCCAG AATCCTTCCG TGGAAGAGGT
TTCCTCAAGA TCTTGTCTGA CGAAGGTTTC GGCTTGTACC GAGGCTGGGG TTGGACTGCT
GCCAGAAACG CTCCTGGTTC GTTTGCCTTG TTCGGTGGTA ATTCGTTTGC TAAGGAATAC
ATCTTTGGCT TGAAGGATTA CAACTCGGCT ACCTGGTCAC AAAACTTTGT CACTTCCATT
TTTGGTGCTT CCGCTTCTTT AATTGTCTCA GCTCCTTTGG ATGTCATCAA GACCAGAATC
CAAAACCGTA ATTTCGACAA TCCTGAATCC GGTTTCACAA TCTTGAAGAA CATGGCCAAG
AAAGAGGGCC TCTCCGCTTT CTTCAAGGGT TTGACTCCTA AGTTGTTGAC CACTGGTCCT
AAGTTAGTCT TCTCCTTTGC ATTGGCGCAA TCGTTGATCC CAGCCTTCGA CAAGTTGATC
AAGTAG
 
Protein sequence
MSPAASTDKK QSGIARVLGS ASAGICEIAV FHPVDTISKR LMSNHGKVTS AAQLNTVIFR 
EHAEKALGKR LFTLFPGLGY AACYKILQRV YKYGGQPFAN EFLTKNFKDS YDSWFGPKTG
KALMSATAGS LIGIGEVVLL PLDVLKIKRQ TNPESFRGRG FLKILSDEGF GLYRGWGWTA
ARNAPGSFAL FGGNSFAKEY IFGLKDYNSA TWSQNFVTSI FGASASLIVS APLDVIKTRI
QNRNFDNPES GFTILKNMAK KEGLSAFFKG LTPKLLTTGP KLVFSFALAQ SLIPAFDKLI
K