Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60303 |
Symbol | |
ID | 4839082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 695996 |
End bp | 697297 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390397 |
Product | predicted protein |
Protein accession | XP_001384798 |
Protein GI | 150865539 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCT CTGCCGATTT CTTATCGAAG GGAATAGACT TAGTCCAGAA GGCTATCGAT GCCGACACTG CCACCCGCTA TGAGGAAGCT TACAAACTCT ACTACAACGG CTTGGAGTAC TTGATGTTGG CTATCAAATA CGAGAAGAAT CAGAAGTCCA AGGAACTCGT CAAGTCCAAG TTCACTGAGT ACTTGACTAG AGCTGAACAG TTGAAAGATC ACTTGGAAAA GCAACTGAAC AAGTCAAACT CTGCCGAAAG CTCATCAACG AACGGATCTA CAAAGGCAAA GAAGAGTGGC GACGGTGACG ATGACGATGC CGATACTAAG AAGTTGAGAG GAGCTTTAGC TGGTGCCATT TTGTCAGAGA AGCCCAATGT CAAATGGGAG GATATTGCTG GATTGGACGC AGCCAAGGAG GCGTTGAAGG AAGCCGTGAT TTTACCGGTC AAGTTCCCCC AATTATTCGT CGGGAACAGA AAGCCTACGT CCGGTATCTT GTTGTTTGGG CCTCCAGGTA CGGGTAAGTC ATATTTGGCC AAGGCTGTGG CCACCGAAGC CAACTCTACT TTCTTCTCAG TTTCATCGTC TGATTTGGTA TCCAAATGGA TGGGTGAATC CGAAAGATTA GTCAAGCAGT TGTTTACAAT GGCCAGAGAA AACAAGCCGG CCATTATCTT CATCGATGAA GTTGATGCTT TGTGTGGTCC CAGGGGAGAA GGAGAAAGTG AAGCGCTGAG GAGAATAAAG ACAGAACTAT TGGTTCAGAT GAACGGGGTT GGAAACGATT CTAGTGGTGT GTTAGTCTTG GGAGCAACCA ATATTCCATG GCAATTGGAC GCCGCCATCA GAAGAAGATT CGAAAGAAGA ATCTATATTG CTTTGCCAGA AGTAGAGGCC AGGACTAGGA TGTTTGAAAT CAATATCGGT GGTGTTCCTT GTGAATGTAC TCCTCAGGAC TACAAGGCCT TGGCCGAGAT GACTGATGGA TACTCTGGAC ACGATGTGGC CGTTGTAGTA AGAGACGCAT TAATGCAGCC TATTAGAAAA ATCCAGCAAG CAACCCACTT CAAGCTGGTA TTAGATGACG ACGGGAATGA AAAGTTGACT CCTTGTTCTC CAGGAGATGA TGGCGCAAGA GAAATGAACT GGATGGATAT TGGAACAGAC GAATTAAAGG AACCTCCATT GACAATTAAA GACTTCATCA AATCCATAAA GAGTAATAGA CCTACTGTCA ATGAAGCCGA TATTCAAAAC CACATTAAAT TCACCGAAGA TTTTGGTCAA GAAGGAAACT GA
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Protein sequence | MSGSADFLSK GIDLVQKAID ADTATRYEEA YKLYYNGLEY LMLAIKYEKN QKSKELVKSK FTEYLTRAEQ LKDHLEKQSN KSNSAESSST NGSTKAKKSG DGDDDDADTK KLRGALAGAI LSEKPNVKWE DIAGLDAAKE ALKEAVILPV KFPQLFVGNR KPTSGILLFG PPGTGKSYLA KAVATEANST FFSVSSSDLV SKWMGESERL VKQLFTMARE NKPAIIFIDE VDALCGPRGE GESEASRRIK TELLVQMNGV GNDSSGVLVL GATNIPWQLD AAIRRRFERR IYIALPEVEA RTRMFEINIG GVPCECTPQD YKALAEMTDG YSGHDVAVVV RDALMQPIRK IQQATHFKSV LDDDGNEKLT PCSPGDDGAR EMNWMDIGTD ELKEPPLTIK DFIKSIKSNR PTVNEADIQN HIKFTEDFGQ EGN
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