| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60178 |
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| Symbol | PMR2 |
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| ID | 4839251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 538376 |
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| End bp | 541597 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390566 |
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| Product | putative Ca2+ ATPase |
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| Protein accession | XP_001384767 |
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| Protein GI | 150865517 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.194975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCCTA CTGACTCGGA AACAGTTCAG TCCAAATTGG ACGAAAGCGA AATCACCTCG
GCCATCACTG AAGATGAAAA CGTTAGGTTC GAAGAAGAAA GGGGTCGTTC TAGAGTGCCT
AGAAAGAGAA GATTTTCTCG CCACTCCAGA GATGATTCTT CTCTCTTCAC GGTGAAAGAA
AGAGTAAAAC CGGAAGTTGT TTTGCCAACT ATCTTCAGGA CTGTCTCTCA CAAGGTAGAA
AGTGAACTTG AAAACAAAAA CAAGTTAGAA TCAACCAGTA CAAAGTTCAC TAGATACACA
TATCACACCC AATCTCCAGA GACAATAGCC AGTAAGTTCA CTACTAGTTT GTCGAATGGG
TTATCTGATT TCCAATGCAA GAAAAATGCT AAGGAGTTTG GTCCCAATGT TCAGTCCAAG
CCACCCTCCA GGCTCTTGAA GAAGATTTTT ATGTACTTTT TTGGTGGTTT TGGGGCCTTG
TTGCTTGCCG GTGGTGTCTT ATGTATCATT TGTTGGAAGC CTTTGGGCCA ACCTCCAGCA
GTTGCAAATT TAGTGCTTGG TATCATCTTG ATTATCGTTT TCATCTTGCA AGCAATGTTC
AACTTCTTCC AGGATTATTC CAGTTCCCGT GTTATGGATT CTATTCATGA CATGATTCCA
GCAGAAGCTG TTGTCATTAG AGATGGAAAT CTTATGAATG TTGCTTCCAA GGATTTGACA
GTCGGTGACT TGGTCAAATT TACCGTCGGG TCGAAGATTC CTGCTGATAT CAGAATTGTC
GACTGTTCTC CAGATCTATC TTTCGATAGA TCTGTTTTGA CCGGTGAATC GAAGCCTATA
CCTGCTGCAT CTCTAGCAGA GCCAGAAAAG TCAAACTATC TTGAAAGCAA TTGTATTGCA
ATGCAAGGTA CATTTTGTGT CGCTGGAACC GGAAGAGGTA TTGTAGTATC CATTGGTGAT
GAAACAATTT TTGGCTCTAT TGCCAAGATG TCGTCAACTC CAAAAAAAGG ATTATCTCCA
ATGCAATATG AAATTCTTCG ATTTGTTGCT TTGACTTCTT TGGTTATCGT CATCTTAGCT
GTTCTTATTA TCGTCCTATG GGCTACTTGG TTGAGAAAGG ATTATCCTGG TTGGATAAGT
GTTCCTACCT TGATCGTTGA TATTGTGTCT GTTGCTGTTG CTTTCATACC AGAAGGTTTA
CCTATTGCTT TAACTACATG TTTGATTATT ACTGCTAACG AAATGAGAAG GAATAATATT
TTGTGCAAAT CATTAGCAGT TGTCGAAACG TTGGGATCCA TTAGTGTTTT GTGTTTTGAC
AAAACTGGTA CGTTGACCAA GAATATGATG GTGGTTACAG ACGTTTGCAA TGGTACTTCT
GAGGTAGATT TTGATGAAGT TGATCAAACC CAGCCAAAAG ATAAACATCT TTTGACTGTC
TCGGCATTGT GCAACGAATC CTGTTTAGTC AATGGAAAGG CAGTTGGTGG AAATGCTACG
GATAGAGCCA TCTTACAATT CGCCCAGAAG ATGACTCTGA CTGAAGAAAT TAAGGACGCT
TGGGTAAAGA AGCTTGATGT CTCTTTCAAT TCCAAGGATA AGTACATGAT GAGTATGTAC
GAGCCAAAGA TCAATAATTC CTCCATTTGG AGTGATATCT GCTTGAATTC GGACTACATT
TATGAGGAAA CATATTTCAT AATGGTGAAA GGTGCACCTG ATATCTTATT GGAAAGGTGT
GAGTTGTTGT TGCAAAAAGA TGGAACTTGC ACTCCTATTA CTAATGCTCA AAAAGAGAGA
ATAAGGGCTA TTCAACAAGC CTGGGCTCTG AGCGGTAAGA GGGTTATATT GTTAGCTTCC
AAATTGCTTC CCAAAGAAAG CATTGATTTC ACTGATAGAT TGCAGGCCAC TAAACGTTTG
AAGGAAGATA TTAACAACAA TTTGATCTTT ATTGGTATGC TTGGTATAGA AGATCCACCA
AGAAAGGATA TCGACCAAGT AATTGCCAAA TTGAGACAAG CTGGTATCAA AATTATTATG
ATCACCGGTG ACTTCGAGTT GACCGGTTTG TCCATTGCAA AACAGTGTGG TATAATAACA
ACAGAGAAGA TAGATAAAGT TTCGGACTTG GCTTTCTATG CTGAAGAAGA CGAATTCATG
GAAAAGTCTA TCAGTATTAC TGGTCCTGAG TTAAACAATT TAGATGAAGC TCAATGGGAA
AACTTGATCA AGTATAATGA ATTGGTGTTT ACTAGAACCA CCCCTGAGCA GAAACTCTTG
ATCATCAAAC AATTCCAAAA GTACAAGCAG GTTATTGGTA TGACTGGTGA TGGTATCAAT
GATGCCCCTT CATTGAAACA AGCTGATATT GGAATTTCGA TTGTCGATGC TTCTGATATT
GCCAAAGAAG CATCCGATTT GATTCTTATG AGCGGTGACA GCGACGATCA TTTATTCTTT
TCGATTATCG AAGCGCTAAA GTTTGGTAGG TTGGTGTTTG AAAATCTCAG AAAAACTATC
GGTTACCTCT TACCCGCCGG CACCTACTCT GAACTTTGGC CTGTTCTCTT GAATGTCATT
TTCGGTATGC CTCAAATGTT ATCTTCTTTC TGCATGATTA TTATTTGTTG CATTACCGAT
TGTATCGGTG CTATCGTTTT GGCATATGAG CCGAATGAGA GAAATTTGTT GAGCAAAAAA
CCGAGAAGTG TGACAAAGGA AAGATTGGTT GACTTCAAGT TATTTTTACA TTCATATTTC
ATTGTGGGTA CATTCTACAC GTTCACATCA ATGTTGTTGG CATTTTTAAA CCTCAAGAGA
AATGGAATAA GGTTTGGAGA TGTGACCTTA TCGTATGGTT CCTATGAAGA CATTCCAAAT
ATTGACCATC ACATCAATGT CTCATCTTCT ATCTACTTTG TCAATTTGGT TATTATGCAA
TTGTTCAACT TGATGGCTAT GAGAGTAAGA TACTTGAGCA CTTTTCAACA TTCTCCGTGG
CTAAACAAGA GATTGTTTAT TGTTATGCCA ATTGCTCTTG GTGTGACATT CATCATTAAT
TACATTCCTG GTATTCAAAA GGGATTGAAC TCTGGTCAGG TACCTGTGGA ATATTATTTC
ATCTCTGTTG GCTTTGGTTT GGTTGTGTTG GTGTATGACG AGGCTAGAAA GTTCATTTCC
AGAAGATACC CTAAGGGTAT CGTTGCCAAG ATGTCGTGGT AG
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| Protein sequence | MYPTDSETVQ SKLDESEITS AITEDENVRF EEERGRSRVP RKRRFSRHSR DDSSLFTVKE
RVKPEVVLPT IFRTVSHKVE SELENKNKLE STSTKFTRYT YHTQSPETIA SKFTTSLSNG
LSDFQCKKNA KEFGPNVQSK PPSRLLKKIF MYFFGGFGAL LLAGGVLCII CWKPLGQPPA
VANLVLGIIL IIVFILQAMF NFFQDYSSSR VMDSIHDMIP AEAVVIRDGN LMNVASKDLT
VGDLVKFTVG SKIPADIRIV DCSPDLSFDR SVLTGESKPI PAASLAEPEK SNYLESNCIA
MQGTFCVAGT GRGIVVSIGD ETIFGSIAKM SSTPKKGLSP MQYEILRFVA LTSLVIVILA
VLIIVLWATW LRKDYPGWIS VPTLIVDIVS VAVAFIPEGL PIALTTCLII TANEMRRNNI
LCKSLAVVET LGSISVLCFD KTGTLTKNMM VVTDVCNGTS EVDFDEVDQT QPKDKHLLTV
SALCNESCLV NGKAVGGNAT DRAILQFAQK MTSTEEIKDA WVKKLDVSFN SKDKYMMSMY
EPKINNSSIW SDICLNSDYI YEETYFIMVK GAPDILLERC ELLLQKDGTC TPITNAQKER
IRAIQQAWAS SGKRVILLAS KLLPKESIDF TDRLQATKRL KEDINNNLIF IGMLGIEDPP
RKDIDQVIAK LRQAGIKIIM ITGDFELTGL SIAKQCGIIT TEKIDKVSDL AFYAEEDEFM
EKSISITGPE LNNLDEAQWE NLIKYNELVF TRTTPEQKLL IIKQFQKYKQ VIGMTGDGIN
DAPSLKQADI GISIVDASDI AKEASDLILM SGDSDDHLFF SIIEALKFGR LVFENLRKTI
GYLLPAGTYS ELWPVLLNVI FGMPQMLSSF CMIIICCITD CIGAIVLAYE PNERNLLSKK
PRSVTKERLV DFKLFLHSYF IVGTFYTFTS MLLAFLNLKR NGIRFGDVTL SYGSYEDIPN
IDHHINVSSS IYFVNLVIMQ LFNLMAMRVR YLSTFQHSPW LNKRLFIVMP IALGVTFIIN
YIPGIQKGLN SGQVPVEYYF ISVGFGLVVL VYDEARKFIS RRYPKGIVAK MSW
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