Gene PICST_60162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60162 
Symbol 
ID4839318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp963404 
End bp964294 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content47% 
IMG OID640390633 
Productpredicted protein 
Protein accessionXP_001385195 
Protein GI150865823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0316745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0971418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTG TCATTGCTTC TCACGTGCCC AGTTCCATCT CCACGGACAA GTTGCAAAAG 
TTCTTCTCGT TCTGTGGAGA CATCAAGTCT ATCAATCTTC TCGAGAAGAT CGAAAAGTTC
CTGACTTACG AGGTCAACTT TGAATCTCCC AAGGCAATTG ACACCGCTTT ACTTTTGAAC
GAGGCAGAAT TGGAAGGAGT TCAGATCAAA ATCGAGGCTG GCTCTGGAAG CTCTTCTTCT
ACTAAGAGCG AAGACGCTGA GAAGCCACCC AGCTACTCGG CTGTTCCATC TAAGGTTGCT
CCACTTGAAA AAGGTGAACC ACCTTCTGGC GACAACAAAA TACAGACTGA TGTCACCAAG
ACTGGGGATA GTCACTATGA CGATATCAAC CAGGTAGAAA AGCCTAAGTA TGCCATCATG
GCTCAGTTAT TGGCCAGCGG CTACACTTTA AGCGACAATA TTATTCTGAG AGCCATTGAG
GTCGACAACC AGAAGGGTTA TACTTCCAAG TTCAAGAGCT TCTTGAGCGA TTTGGACCTG
AAATACATCC AATCGAGTAA CCCAGAGTCT GATTTCAACA AGAATGTCGC AGTTGCCCAA
TCGAAGTTGG CTGATTTACA AAGTCAGCTC TACAAGTCGA AGTACACTTC CAAATTCAGT
CACTACTTTG ATAAGGCTGC CAGCCATCCT TACGGAGTCA AGGTGCATGA TTTCTACAAG
GGAGTCGCCC AAAATGTCCA GGATGTCCAC ACTGAAGCCA AAAGATTGAA TGCCTTGCAG
AAGGAACAAC AGGCTGCTGC TGCTGCTTCT ACCCCTACTA GTGCCGCTGA TGCCACTAGT
GCTGCCGCTG CTGCAGAAGA TGCTCCCGTT CTTCCTCCAA GAAAAGAGTG A
 
Protein sequence
MSTVIASHVP SSISTDKLQK FFSFCGDIKS INLLEKIEKF STYEVNFESP KAIDTALLLN 
EAELEGVQIK IEAGSGSSSS TKSEDAEKPP SYSAVPSKVA PLEKGEPPSG DNKIQTDVTK
TGDSHYDDIN QVEKPKYAIM AQLLASGYTL SDNIISRAIE VDNQKGYTSK FKSFLSDLDS
KYIQSSNPES DFNKNVAVAQ SKLADLQSQL YKSKYTSKFS HYFDKAASHP YGVKVHDFYK
GVAQNVQDVH TEAKRLNALQ KEQQAAAAAS TPTSAADATS AAAAAEDAPV LPPRKE