| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59866 |
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| Symbol | THI80 |
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| ID | 4839110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 825167 |
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| End bp | 826168 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390425 |
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| Product | Thiamine pyrophosphokinase (TPK) (Thiamine kinase) |
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| Protein accession | XP_001385167 |
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| Protein GI | 150865803 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.324549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAAGG CTAAGAAGCT CGAGTCGGAA GTGGTGGAAT CCCCGGACGA CATACAGATT
CCAGCTCCGG ATCTTGCGCA TACTCTCATA CGACCCTTCG AGTTCCTTGT CAACTCCAGA
GACAATTGCC ACCGCAACGC ATTAGTCATT CTAAACCAAC TGCTAACAGG TATAGATGTG
CCGCGACTAT GGTCCAATAC AGAATTGCAT GTTTGTGCGG ATGGAGGCGC CAATCAATTG
TACGATTATT TCGAAGCAGA TACAAAATCA CATTCTCACC TAGCCACTGA ACAAACTAGT
GAACAAGCTA GCGATCTCAT TCGTCAGCAG TATATTCCAC AGTTTATTGT AGGAGACCTA
GACTCGCTAC GTGACGACGT TCGTGACTAC TACGAGAGAA AAGGTGCACG TATAATTCCA
CAGTATACCC AATATTCTAC AGACTTTTCC AAAGCTATAG CTACAGTAAG ATTGTACTAC
TATTCTGAAG CACTGAGACA GGTGTTGGTC AATGATTCTA TAGACACCAA CAACGGACTC
GCAGAGATAA TCGAAAAATA CGAAGCCGGT AGCAAGCAAG AGCAAACTGT CCGAATCTAT
ATCTTAAGCG GAATCGGAGG TCGTTTTGAC CAGACCATCC ATTCGATATC ACAGCTCTAC
ATACTCAACC AGTCCCACCC ATTTCTTCAG CATTTCTTCA TCACAACCAG TGATCTCATT
TTCCTTCTTA AGAAAGGCGT TAATTACGTA GCATATCCCA GTAAAACGAC ATTCCATCTG
GCCCAGGTTC CTACCTGTGG CTTGTTACCT TTGGGCAACT CGAAAGTCAT GATATCCAGT
CACGGATTGA AGTATGATGT CCGCAACTGG GAAAGCGAAA TGCTTGGAAA TGTCAGCTCC
AGTAATGGGA TCAGCGGTGT CGATGGTGTT GTTGTTGAAG TATCTGGCCC ACTTGTCATG
AACATCGAAA TAGAGCATGG TGTAGAAGAT CTGAAATTAT AG
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| Protein sequence | MSKAKKLESE VVESPDDIQI PAPDLAHTLI RPFEFLVNSR DNCHRNALVI LNQSLTGIDV
PRLWSNTELH VCADGGANQL YDYFEADTKS HSHLATEQTS EQASDLIRQQ YIPQFIVGDL
DSLRDDVRDY YERKGARIIP QYTQYSTDFS KAIATVRLYY YSEASRQVLV NDSIDTNNGL
AEIIEKYEAG SKQEQTVRIY ILSGIGGRFD QTIHSISQLY ILNQSHPFLQ HFFITTSDLI
FLLKKGVNYV AYPSKTTFHS AQVPTCGLLP LGNSKVMISS HGLKYDVRNW ESEMLGNVSS
SNGISGVDGV VVEVSGPLVM NIEIEHGVED SKL
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