Gene PICST_59814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59814 
Symbol 
ID4839360 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp586128 
End bp586802 
Gene Length675 bp 
Protein Length203 aa 
Translation table12 
GC content46% 
IMG OID640390675 
Productpredicted protein 
Protein accessionXP_001384778 
Protein GI150865524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.423148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.113274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCGT CGACTGTCAT CTTTGTGGCC ACGTTGGCTA TAGCGTTCAT TTTCTTGAGA 
TGGTTGATCG CTCCCATTCC CCAATCCAAC GAGTTTAACA TCGCTGAGGC TGCAGGAAAT
ACTTCTACTG GACAAGAATC CAACAACTCT AGCAATGCCA GTAATACAGG CAATGCCAGA
TCCAGAAGAA GACCGGTCAC GGACAGCATG GTCGAGGTTG TGCAGACTAT CGCTCCAGGT
TTGACGCGTG ATCAAATCGT GTTCGACTTA TCTAACACAG GATCAGTTGA ACTCACCATC
AACAGATACA TGGAGTTGGG CAACTTGCCC TATCCGCCAA ATTCGGCCAG AGGCACCAAC
TCTGCATCAA GCAACGAAAT CCATTCGCAA TCTCAATCTC AAGCATCTTC TAGATCTGCT
ACTGAAGCTA CGATGGAATC GAATTCTAGT CCTAGTCCTA GTTCTAAGAG CATTCCAAAG
AAATCTATCA ACTTGCTTGA AAAGTACAAC ATCAAAGAAG AGGACTTGGC AGTTGGTGAT
TCGACATCCT CATCATGGGA GGCTGATAAA TCAGAGAGGT CCGTCAGCTT GCACCGTAGA
AAACAGGAAA TGATTGTCGC TGCCAGAAGA AGATTGGAGG CCCTGTTGAA AAATGAACTT
GACTTGTCCC AGTAG
 
Protein sequence
MDSSTVIFVA TLAIAFIFLR WLIAPIPQSN EFNIAEAAGN TSTGQESNNS SNASNTGNAR 
SRRRPVTDSM VEVVQTIAPG LTRDQIVFDL SNTGSVELTI NRYMELGNLP YPPNSARGTN
SASSNEIHSQ SQSQASSRSA TEATMESNSS PKEDLAVGDS TSSSWEADKS ERSVSLHRRK
QEMIVAARRR LEASLKNELD LSQ