| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47429 |
|---|
| Symbol | |
|---|
| ID | 4839289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 939795 |
|---|
| End bp | 940812 |
|---|
| Gene Length | 1018 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640390604 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384849 |
|---|
| Protein GI | 126136651 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5019] Septin family protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.112208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.801756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATTAGACAGC GGAAGATCAC CAAGAAAGGG CTCTCTCTAA ACATTCTCTT GATTGGAGAA
AACGGAATTG GAAAGAGAAC CTTTGCCAAT ACCTTATCAA ACACAGTCTT TTTTCCAGAA
GAGATATACC TTGAAGAAGA TGTAGTCAAA AGAATTGAAG TTGATACAAT GGAAGATCTC
AAAATAGAAA CTCATATAAT TGGTAAGTGC TACAATACAA AATTTCAACC AAATAACAGA
TATTAACAAT TTAGATGTCG TAGAACAAAA CTCAACACCC ATTAAGTTGA ACATTGGTTT
GACCAAGAAT TTTGGACATA ACATCGACAA TTCTGGAAGT TACAGGGTGA TTCTTGACCA
CATTTTAGAA GAATATGAAA CTTTTCTTTC GGAAGAAAGC AAGATTAACC GTAACCCATA
TCTAACAGAC AAGAGAATCC ACGTTGGGTT GTACTTTTTA AGAGCAACAA GCAGAGAGTA
TGTACCACGA AGACTGAATT TGACGAAGGA TTATTCACTA ACATCATCGT CTAGGCTCAA
TGAATTTGAC ATACAGAATA TGAAACAAAT CGGCGACAGA ATTAACCTAA TTCCAGTAAT
TAGCAAAGCT GACACATTGA CACAAGAAGA ATTAGAGTAC AATAAGTACC TCATCAGGAA
GTCTATTGCC GATCATAATA TCCCAGTTTT CAATTTCTTG AAAGACGTTA ACGAGCAATT
AGCTTCAGAA GAATTAGAAG ACTACCAATA TATAAAGGAA GTCGATAAGG CGGTTCCCTT
TGGAATTATC AGTAGCAACA TCGTCATCGA AGGTCAAAGA GTTAGAGTTA CTACTTGGGG
AAGAGTCAAT ATTGAAGACG AAAACAATTG TGATTGTAAG CTTCTTCGTA ATGTACTTCT
AGGGTCACAT CTTCAAGACT TCAAAGATGC CACAATCAGC ACAAAGTATG AAGCGTATAG
AGTCGAGCAA TTGATGAAAC AATTCCAAGA CAGCCAAAAC AACTTTCCCC GTAAATGA
|
|---|
| Protein sequence | IRQRKITKKG LSLNILLIGE NGIGKRTFAN TLSNTVFFPE EIYLEEDVVK RIEVDTMEDL
KIETHIIEQN STPIKLNIGL TKNFGHNIDN SGSYRVILDH ILEEYETFLS EESKINRNPY
LTDKRIHVGL YFLRATSREL NEFDIQNMKQ IGDRINLIPV ISKADTLTQE ELEYNKYLIR
KSIADHNIPV FNFLKDVNEQ LASEELEDYQ YIKEVDKAVP FGIISSNIVI EGQRVRVTTW
GRVNIEDENN CDCKLLRNVL LGSHLQDFKD ATISTKYEAY RVEQLMKQFQ DSQNNFPRK
|
|---|
| |