| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47344 |
|---|
| Symbol | |
|---|
| ID | 4839497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 1304137 |
|---|
| End bp | 1306044 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640390812 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384940 |
|---|
| Protein GI | 150865634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.649263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTTCAGAGAG AGCAATGGAA GATTCTTAAA TCCACAATCC ACAGCCAAAT TTTCCGAGCA
GATAGAAACA ATATCAAAGA AGTTATCAAG GAGTTGTTCC AGGTGAATCT TATCCGAGGA
CAAGGCATTG TTGTAAGAGA AGTGATGAAG GCTGTTGATG ATCGATATGT AGCAGTATAT
TCGAGTATTA TTGCAGTGCT AAACCTGAAG ATACCCGAAA TTGGCGAGCT TCTTGTCCAA
CGATTAGTGC TTCAATTCAG AAAATACTAT AGGGCCAACA ATAAGCAATA TTCTCTTGGT
TCGGCACTAT TCATTTGCTA TTTGATCAAC CAACAGGTGG TTAGTGAAAT CTTGATTCTC
CAGATTGTGC AATTGCTCTT GGAGAGTCCT ACCGACGACG ACATAGACAT AGCCATAAAC
TGCTTGATGG TAGTTGGAAA GTATTTAAGT ATAAACTCAG CGGTGGCGAA CAATATGATT
TACTCTCGGT TGAGAGACAT TTTACATGAC AATAGGAACA TTAACGAGAA GAGCCGTGAA
GCGATCCAGG ACCTTTTTCA AATACGCAAA ACAAACTTCA AACAGTATCA GATTGTAGAA
AAGAAGTTAG ATTTGGTGGA AAATGAAGAT AAGGAGACCC ATATAATAGA GCTTGGAGAG
GAGATACATT CGCGAAACGA ACTTAATATC TTTACAGTAG ATGAAGAGTA CGATGACAAC
GAGAAAGAAT ACGATGAGAT ACGAAAAGAG ATTCTTGATG ACAAAAAAGA GGAAGAGGAA
CTGAAGGAAG AGGAAAAAGA ATCAGAAGTC GTGAAATTAG ACATTGAAGA CATGACCCAA
TCTGAACTAC TACAATACCA GAAAACAGTA TATTTAACAG TGATGTCTTC GCTTTCTTCA
GACGAAGCAG TGCATAAGCT CTTGAAGCTT TCGTTCTCAA AGTCGAACTC CGATAAGCTC
AATACGAACG AAATTCTTGC TGACATGATT GTGAAGTGTT GTTCACAGGA AAAAACTTAC
TCCAAGTTCT TTGGGGTTAT AGGAGAGAAA CTCTGTTCTA GAAATAAAAC CTGGCAGTCC
ATCTTTGTAC AATTGTTCAA GAAATACTAC GAGACGATAA ATCTGTTTGA AACGAATGCC
TTGAGAAATA TAGGTAAGTT CTTTGGCCAT TTGTTCGCTT CAGACAAGTT AGCTATAGAT
CAAGCATGGA ATGATATTAA GCTTACTGAA GAATCCACCA ATGCCGCTAG TAGAATCATG
CTAAAGTTCA TTTTTCAAGA AATGATCGAA GAGTTGGGTA CCAATGAACT CAAGGAACGA
CTTATTAATG ACGACTACAT AAGAGACAAA ATTACAGGCA TCTTTCCTGT TGTGGACGTG
ACATGGAAAG ATGCTGAACA TCTCCGTTTT TCAATAAACT ACTTTACAGC CATTGGACTA
GGAGTGCTAA CTGAAGATAT GAGAGACATC TTAAAGGATC TTCCTCCTCC GCCGGCTGTT
GAGGAAGAAA GAGGAAGATC CAAATCTAGG GCGATGAGAT CACGTAGTGA ATCACGCAGC
TATTCAAGAA GCGGAAGCTA CTCAAGAAGC TATTCAAGAA GCTACTCCAG AAGTAGAAGC
AACTCTAGAA ATTCCAGAAG CTCTAGAAGT AGAAGCTACT CGAGATCTCG GTCCAGATCT
CGTTCACCAT CTCGTTCTCG CAGCTATTCG CGGTCTCCGT CAAGGTCCCG TAGCTACTCT
AGATCCCGCT CTCGCAGCGG CTCCAGAAGC ATCTCATACT CCAGATCTCC CAGCCCCGAT
GCCAGAAATC ACTCGCGGTC ACGAACTCCA TCCAAAAACC GTTATCAGAC CAAAAGAGCC
AACTCGAGGG AGCTGTCTCA TGTCCCTTAC AAACGGAACA AATACTGA
|
|---|
| Protein sequence | FQREQWKILK STIHSQIFRA DRNNIKEVIK ELFQVNLIRG QGIVVREVMK AVDDRYVAVY
SSIIAVLNSK IPEIGELLVQ RLVLQFRKYY RANNKQYSLG SALFICYLIN QQVVSEILIL
QIVQLLLESP TDDDIDIAIN CLMVVGKYLS INSAVANNMI YSRLRDILHD NRNINEKSRE
AIQDLFQIRK TNFKQYQIVE KKLDLVENED KETHIIELGE EIHSRNELNI FTVDEEYDDN
EKEYDEIRKE ILDDKKEEEE SKEEEKESEV VKLDIEDMTQ SELLQYQKTV YLTVMSSLSS
DEAVHKLLKL SFSKSNSDKL NTNEILADMI VKCCSQEKTY SKFFGVIGEK LCSRNKTWQS
IFVQLFKKYY ETINSFETNA LRNIGKFFGH LFASDKLAID QAWNDIKLTE ESTNAASRIM
LKFIFQEMIE ELGTNELKER LINDDYIRDK ITGIFPVVDV TWKDAEHLRF SINYFTAIGL
GVLTEDMRDI LKDLPPPPAV EEERGRSKSR AMRSRSESRS YSRSGSYSRS YSRSYSRSRS
NSRNSRSSRS RSYSRSRPDA RNHSRSRTPS KNRYQTKRAN SRESSHVPYK RNKY
|
|---|
| |