Gene PICST_47307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47307 
SymbolYFH7.1 
ID4839429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1447045 
End bp1447767 
Gene Length723 bp 
Protein Length240 aa 
Translation table12 
GC content47% 
IMG OID640390744 
Productpantothenate kinase-like protein 
Protein accessionXP_001385279 
Protein GI126137511 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1072] Panthothenate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.169433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTA TTCCCCAATG CTGTGTTCCA CAGCAGTACT CTACAGACCA AGTCGGCGAA 
GTAGCACTAC GAGTTTTAAA TAACTATAAG AACAAGATAA AGAATAACTT GTCGAATCGG
TATGTGATCT CGTTAGCAGG TATTCCGGGA TCTGGGAAGT CGACATTTGC TGAGAAGGTG
ACCAAAGAGC TCAATGGTCT AGATGGAGAT GTAAAGGCTG TAGTACTTCC ACAGGATGGA
TTCCATTTGT ATCGTGCCGA GCTTCAACAG CTTCCTAATG CCGAAGAAGC CGTTACAAGA
CGTGGAGCTC CGTTCACGTT TAATGCGAAT GCATTTGTAG GATTAGTAGC GAAGCTTAAC
GATCCCCAGT ACTTGGTGGA AGCGATCCAG GCTCCGTCTT TTGATCATAA GTTGAAGGAT
CCAGTGGAGA ACGACATTCA CATTGGCCCA GACACTCGTA TCATCATTGT CGAGGGCAAC
TATGTCTCTC TCACCGACGA CTACTGGAAC CGGATCAGCG ACTATGTTGA TGAGACATGG
TTTATCCAGA CTCCAATGGA AATAGTCAGA GACAGAATCG TGAAACGCCA TCTTGATGCT
GGAATCGCCG CAAGTCACGA GGAAGCGATC CAGAGAGTAG ATGGCAGTGA CTTGGTCAAC
GCCCATTATG TGTTGAACCA TTCCAAGACC ACCGACGTGG TTATTATCAC CGAGAGCATA
TGA
 
Protein sequence
MDSIPQCCVP QQYSTDQVGE VALRVLNNYK NKIKNNLSNR YVISLAGIPG SGKSTFAEKV 
TKELNGLDGD VKAVVLPQDG FHLYRAELQQ LPNAEEAVTR RGAPFTFNAN AFVGLVAKLN
DPQYLVEAIQ APSFDHKLKD PVENDIHIGP DTRIIIVEGN YVSLTDDYWN RISDYVDETW
FIQTPMEIVR DRIVKRHLDA GIAASHEEAI QRVDGSDLVN AHYVLNHSKT TDVVIITESI