| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47305 |
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| Symbol | PRP24 |
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| ID | 4839134 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 524284 |
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| End bp | 526863 |
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| Gene Length | 2580 bp |
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| Protein Length | 837 aa |
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| Translation table | 12 |
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| GC content | 37% |
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| IMG OID | 640390449 |
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| Product | U4/U6 snRNA-associated splicing factor |
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| Protein accession | XP_001384763 |
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| Protein GI | 150865513 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0758883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.157057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAAGCATTGC TTAACTTTCA TGAGGATCGA ACTTTCGATG AACCATCATT CAGGAATTGG
AAAGAGCGAA TAGATCATTT TCGTAGTAAG GAACTGGATC CGGAGTTGGT GACAGATTTA
TTACAGGAAG CTATGGCTGA TTTAAAATTC CATTACTACG ATATTGACAA GTTTATAGAT
TACACAATCG ACTACTTTGC AATGGCTGGA GCTACAGGAT CTGAAATAAT GAACCTTCGT
CTTCAACTTC TAGAAATTCC ACATGCTGGA TTGCAGGATT CTTTTTCTAA AATGTCGGCT
ACTGTTTCGA AATACTCAAC CCAGTATGAA GACGATATGT CAGTAGCTCA GAAAACCTAT
TCAGCAACCT TGAAGAAACA AAAACATATT GAAATCTTCG AATTAGCCTT ATTAAGAGAA
CCAGATAACA TGTCTCTATG GACAGAATAT GTGAAAAACT ACGCAAAGTA CATGGCTAGG
GAAGATGATG ACGCTCTTTT GTCGATATTT CGTCGAGCAC CCAAGTCTGA TGAGCTGTGG
CTTCCCTTCT GTTTGTTGTG TATATATACT GTCTATGAAC AGCAGTTCAG AGGTAAAGTT
CTCGACGATA GAGTCTTGCT CCATATAACA GGCGAGCTTA CTAGATTGTT TCCCTACCAT
CCTTCGGCTT ACACAGAAGC ATTGAAGCTT CCAGTCGACC GGATAAAAAT GATAATTACC
ATTAAAAATT TGGATTTAAT TCATAAGTCT GACTATAATG AATGGAAGAA GGTTGCGTTG
GCTATTTTGA CATATTTATC ATCTGGAATT TCATGGAATG ATCCAGAAAT AAAGAAGCTA
CAAGAGAAAC TAGATGTAGA TCTAGTAGAC AAGTACAAGG ATGAACCCAA GACTTTTCAA
AACATTTCCT TTGCTCAGAA GCTTCAAAAC TTCGCAATCG AGTTTGCTGA ATTTGCTATA
GTTGAAAACA ATGATATTTT TCATTCTGTT GAAAAGCTTT CGATTACACT TTTGGAACGA
CTTGGAGATC AAGAGAGTGT TCATAAGCTT GCTAAGCAGT TGGTGGAACG TTTTTCTGAT
CAATGTGAGG TATGGCTCTT TCTCATAAAT TTTTACATCA GTGTAAATGA AAACAAAGAT
TTTATAACTT CTTTGTTTGA GAAGGGAGTC TCCTTTGCAA AATCTCTTGA TTGGCCAGAA
AGGTTGATTG AAGAGTGGAT ACACTTCGAA ACAGTTTATG GTACACCAAT ATCATCAAAG
AAAGCTGTCT TGTTTTGTAA TAATACTTTA CAGGATTTGG CATTGGAAAT TCAAAATGAA
AGCAACGAGG AGGTTGATGA TAAGCAGGCA GTTCTATCAG AAGATGAAGA TAGTGAAGAA
GGAGATAAAA AACGTAGAAA ATTGAATAAA AACGATTCAT CTGCTATAGT ACCTCCTAGA
TCGAGAGAGA ATTTGATGGT TAAAGTGGAA AATTTGACTT CCGATGTCAC CAGGAATGAT
ATAACTCGTT TCTTTAGTGA CTGTGGAAGT ATTAGAGAAT TGTCTATTGT GGAAAATAGT
GCGACAATTG AATTCCATGA AGAACGAGAA GTTTTGGCTG CAATTACTAA GGATAAGAAG
AAAATTTCTG GGAAGGAGAT CTCTGTGAAA CGAATAGTGA ATTGTATTCT TTTTGTTAAC
AATTACCCAC CCAGTATGGA CCAGGGCTGC ATAAGGTTGA TGTTCGAACA GATAGGTAAG
TTGGCCAGTA TCAGGTTTCC TTCTCAGCGT TCGAACCATA CTAGACGGTT CTGCTATGTA
GAATATGAAA ACGCCAATTC TGCTCTTCAA GCTGTCAAGA TTTATAATGG AAAGGTATTG
GTAGATAATG TTCTCCATCA GGATTTTGCT CTTCAGGTTG CTATATCTGA TTCTGAAGCC
AAGTCAGATA GAGAAACCAA GATGGAAAGC CAGATTAGAG TGAAGAACAT TGACTACATG
CTTGATATTG AAGCCATCAA AGGCATGTTT GTTGAATGTG GAACTGTTAC TCTGGTAGTA
ATTCCTAAGT TTCAGCGAAA TAATTTTAAT CAAAAGAACA ATGGTTTGGC ATACGTTACT
TTTGAGAGTA ATCACGAAGC ACAAAAGGCT GTACAAATGG ATGGAAAGAT AATTGGAGGT
AGACCAATTT CGGTTGCTTT AAGCTCGCGT TCACAGAAAT ACTCACAGTC ACACAAGCAT
GATAATGGCT ATTCAGCATC CAAATATTCA CAATTTGAAG ATGTAAGAAC TGTGGGTGTT
ACTAATGTTG ATAACACATT GACTGCAGAG CAAGTTAAAC TATTTTTCTC TACCAATGGA
GGTGTTGTTA GTAAAGTTGA GATCTTTCCT GAACATGCTG TGGCCATGGT GGAGTTTGAA
AAGGCATCAG ATGCTGGAAA TGTGACTATG AGTCTTAGAA CCAAGCAATT GGGAAACAGG
GAGATTGTGT TGACGTCAAT GGCAGAAGTT GTTAGTATTA TTAAGGGAAA GAAGGAGCTG
CATCAACAAC CTGTTCCAAA GATGATGGTT CCAGCATCAA TACGTCGCAA GAGAAAGTAA
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| Protein sequence | KALLNFHEDR TFDEPSFRNW KERIDHFRSK ESDPELVTDL LQEAMADLKF HYYDIDKFID
YTIDYFAMAG ATGSEIMNLR LQLLEIPHAG LQDSFSKMSA TVSKYSTQYE DDMSVAQKTY
SATLKKQKHI EIFELALLRE PDNMSLWTEY VKNYAKYMAR EDDDALLSIF RRAPKSDESW
LPFCLLCIYT VYEQQFRGKV LDDRVLLHIT GELTRLFPYH PSAYTEALKL PVDRIKMIIT
IKNLDLIHKS DYNEWKKVAL AILTYLSSGI SWNDPEIKKL QEKLDLQNFA IEFAEFAIVE
NNDIFHSVEK LSITLLERLG DQESVHKLAK QLVERFSDQC EVWLFLINFY ISVNENKDFI
TSLFEKGVSF AKSLDWPERL IEEWIHFETV YGTPISSKKA VLFCNNTLQD LALEIQNESN
EEVDDKQAVL SEDEDSEEGD KKRRKLNKND SSAIVPPRSR ENLMVKVENL TSDVTRNDIT
RFFSDCGSIR ELSIVENSAT IEFHEEREVL AAITKDKKKI SGKEISVKRI VNCILFVNNY
PPSMDQGCIR LMFEQIGKLA SIRFPSQRSN HTRRFCYVEY ENANSALQAV KIYNGKVLVD
NVLHQDFALQ VAISDSEAKS DRETKMESQI RVKNIDYMLD IEAIKGMFVE CGTVTSVVIP
KFQRNNFNQK NNGLAYVTFE SNHEAQKAVQ MDGKIIGGRP ISVALSSRSQ KYSQSHKHDN
GYSASKYSQF EDVRTVGVTN VDNTLTAEQV KLFFSTNGGV VSKVEIFPEH AVAMVEFEKA
SDAGNVTMSL RTKQLGNREI VLTSMAEVVS IIKGKKESHQ QPVPKMMVPA SIRRKRK
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