Gene PICST_47260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47260 
Symbol 
ID4839244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1030455 
End bp1030835 
Gene Length381 bp 
Protein Length126 aa 
Translation table12 
GC content48% 
IMG OID640390559 
Productpredicted protein 
Protein accessionXP_001384870 
Protein GI150865591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGC AAGATGAAGA CCCATTGGGC CCTCCCACCA ACACCCAGAA CATAGACTTG 
TCCAAGTTGT CGCCCCAGGA GTTGCGTATC TACCGAATGT ATGGCAAGTT GCCTACGACC
CAGCAGATAT TGCTGTCGAA ATTTCAGGAC AAAAAGTATT TTGACAGTGG CGACTACGCT
ATGCAAAAAC AGCTAGGGGG AGGATTCAGA TCCGGACTCC CTGGTGGAAT ACCCATGAAA
CACCCCAACG CCGAAAAGGT CAAGGAAATA TATAACCGGA ACTCGATCAG TGGTTCCAAT
TCGGGGATCT TGTTCAATGG GAAATCAGGC TTGTTGAACG AGTCCACCCC TGGTGAAGAA
GAAGAATCTG AGTCGAAGTA A
 
Protein sequence
MSLQDEDPLG PPTNTQNIDL SKLSPQELRI YRMYGKLPTT QQILSSKFQD KKYFDSGDYA 
MQKQLGGGFR SGLPGGIPMK HPNAEKVKEI YNRNSISGSN SGILFNGKSG LLNESTPGEE
EESESK