Gene PICST_47115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47115 
Symbol 
ID4839164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1623918 
End bp1624718 
Gene Length801 bp 
Protein Length266 aa 
Translation table12 
GC content41% 
IMG OID640390479 
Productpredicted protein 
Protein accessionXP_001385313 
Protein GI150865908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.622953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.308604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTAATAGCCA AGTATCAAAC GAAGTTGGAG AAAAAGGCAC AAGATTTGGG AGTCAACAAC 
ATAGACGAAC TACACAACAA ATTAAAAGAT GAAATAGAAC TTAAGAAGAA GGAGCTCAAC
AAGATCGATC CACTTGCTGA GTTGGAAGAG TATGAACGTA GACAAGCCGA GGAAATCGCC
AAAGATCCAA ACTCCAAAAC CATCAAGGTT AGATCACCTA TTGCCAAAGA CACACCAAAG
TTGCCTTACA AGGACTTGAA TGCCTATGTT GATGTAGAAA AGGTTAAAGA GTTGCCTCGT
AAGGAGTTAG AGTTCATCTG GAAAGCACGC TTCCATTCGA AGGAAAGAAC TTTACATGCT
GTATTGGAAG ATCTCCAATT TGCTTCCATG TATGTGAATG CATTCAAGAA TCCTAGTTTC
ATCTTGCCAT TGCCTAAGAA CAGCGATGGC TACGAAATGC ATTTTGTACA ATGGTCGTTT
GTTGGTCCCC AGACTACGCA TTGCATGTTG ACCACTGTAG CTGAGTATAA GCTTCATAAG
GAGTATGCTA AGCCGCACAC GACATTAATG TTCCATCAGG ATTTGGCACA AGAAAAAGGT
GTAGTGTTGA TGAATGGTCA CTGTGAAACA GAAAGCCTGT TGTCTATGGA TGAAGCTCAG
CTTCTTGTGC TTAATGTTCA GAGGTTTTAC GGTGGCTTAG GAAAGCATGA ACTGGCACTT
GCTTTGCTCA GAGATTTCAC CTCTGGTAGC GAGAAATTTG ATATGGACAA GTTGATTGCT
GAAGCAACCA GTTTCCAGTA G
 
Protein sequence
LIAKYQTKLE KKAQDLGVNN IDELHNKLKD EIELKKKELN KIDPLAELEE YERRQAEEIA 
KDPNSKTIKV RSPIAKDTPK LPYKDLNAYV DVEKVKELPR KELEFIWKAR FHSKERTLHA
VLEDLQFASM YVNAFKNPSF ILPLPKNSDG YEMHFVQWSF VGPQTTHCML TTVAEYKLHK
EYAKPHTTLM FHQDLAQEKG VVLMNGHCET ESSLSMDEAQ LLVLNVQRFY GGLGKHESAL
ALLRDFTSGS EKFDMDKLIA EATSFQ