Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_47115 |
Symbol | |
ID | 4839164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1623918 |
End bp | 1624718 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390479 |
Product | predicted protein |
Protein accession | XP_001385313 |
Protein GI | 150865908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.622953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.308604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTAATAGCCA AGTATCAAAC GAAGTTGGAG AAAAAGGCAC AAGATTTGGG AGTCAACAAC ATAGACGAAC TACACAACAA ATTAAAAGAT GAAATAGAAC TTAAGAAGAA GGAGCTCAAC AAGATCGATC CACTTGCTGA GTTGGAAGAG TATGAACGTA GACAAGCCGA GGAAATCGCC AAAGATCCAA ACTCCAAAAC CATCAAGGTT AGATCACCTA TTGCCAAAGA CACACCAAAG TTGCCTTACA AGGACTTGAA TGCCTATGTT GATGTAGAAA AGGTTAAAGA GTTGCCTCGT AAGGAGTTAG AGTTCATCTG GAAAGCACGC TTCCATTCGA AGGAAAGAAC TTTACATGCT GTATTGGAAG ATCTCCAATT TGCTTCCATG TATGTGAATG CATTCAAGAA TCCTAGTTTC ATCTTGCCAT TGCCTAAGAA CAGCGATGGC TACGAAATGC ATTTTGTACA ATGGTCGTTT GTTGGTCCCC AGACTACGCA TTGCATGTTG ACCACTGTAG CTGAGTATAA GCTTCATAAG GAGTATGCTA AGCCGCACAC GACATTAATG TTCCATCAGG ATTTGGCACA AGAAAAAGGT GTAGTGTTGA TGAATGGTCA CTGTGAAACA GAAAGCCTGT TGTCTATGGA TGAAGCTCAG CTTCTTGTGC TTAATGTTCA GAGGTTTTAC GGTGGCTTAG GAAAGCATGA ACTGGCACTT GCTTTGCTCA GAGATTTCAC CTCTGGTAGC GAGAAATTTG ATATGGACAA GTTGATTGCT GAAGCAACCA GTTTCCAGTA G
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Protein sequence | LIAKYQTKLE KKAQDLGVNN IDELHNKLKD EIELKKKELN KIDPLAELEE YERRQAEEIA KDPNSKTIKV RSPIAKDTPK LPYKDLNAYV DVEKVKELPR KELEFIWKAR FHSKERTLHA VLEDLQFASM YVNAFKNPSF ILPLPKNSDG YEMHFVQWSF VGPQTTHCML TTVAEYKLHK EYAKPHTTLM FHQDLAQEKG VVLMNGHCET ESSLSMDEAQ LLVLNVQRFY GGLGKHESAL ALLRDFTSGS EKFDMDKLIA EATSFQ
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