Gene PICST_46950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46950 
Symbol 
ID4839602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp244440 
End bp245294 
Gene Length855 bp 
Protein Length284 aa 
Translation table12 
GC content43% 
IMG OID640390917 
Productpredicted protein 
Protein accessionXP_001385063 
Protein GI126137079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC TTCTCCAGTG GTCGATAGCC CAGCAGTCAG GGGACAAGGA GGCCATCCAG 
AAGCTCGGAC AGCCGGATCC CAAGATGCTT GAGCAACTTT TCGGAGGACC AGATGAACCT
ACGCTCATGA AACAAGCCAT AGCAGTGATA CAGAACCCAG AAGCCACATT GGAAGATAAA
GAAATTGCCT TCGATAACTT CGAGATGCTC ATAGAAAACT TGGATAACGC CAACAACATC
GAAAATATGA AGTTGTGGCC AGCTATAGTT AATCAATTGG AAGATGGAGT TCCAGCTACG
CTCAGGGTCT ATGCTGCTTC AGTGATTGGA ACTGCCGTTC AAAACAATCC AAAGGCACAA
GAAGACTTCA ACAAGACAAG TGGTCCAGAA AAGTTGATCA AAATCGCTTC TGACGAAAAG
ACTCCTAAAG ATTTGCTTCT TAAGACGTTA TATGCTCTTT CCTCAGCCAT GAGAAACTTC
AAGCCAGCAT ATGCCAACTT CGTAGAAAAC AACGGCTGGA ACATCATCAG TCTCTCCAAA
GAAAATGACC ACAAGATTCA GTTGAGACAG TTGTCAGCTG TATCGTCTAT CTTGTCCACA
GGTCTTGACG AAGACAAACA AGAAAACATC CAGAATGCCA AATTGGTTGA GTATTTGGTA
TCGATTTTGA CCAAAGATGG CCATATAGGT TGTATCGAAA AGGCACTTAA TATCATTTCT
GAACTCGCCC ATTATAAGTA CCAATTTACA TCCACGGAAA TTGCACGGTT AGCACAAGGC
TTGGAACAGA TCGAGACGTT ATCAGACAGA TTGACTGAGG AAGACTTGGT TTCTGCCAAA
AAGATCGTAT CATGA
 
Protein sequence
MDKLLQWSIA QQSGDKEAIQ KLGQPDPKML EQLFGGPDEP TLMKQAIAVI QNPEATLEDK 
EIAFDNFEML IENLDNANNI ENMKLWPAIV NQLEDGVPAT LRVYAASVIG TAVQNNPKAQ
EDFNKTSGPE KLIKIASDEK TPKDLLLKTL YALSSAMRNF KPAYANFVEN NGWNIISLSK
ENDHKIQLRQ LSAVSSILST GLDEDKQENI QNAKLVEYLV SILTKDGHIG CIEKALNIIS
ELAHYKYQFT STEIARLAQG LEQIETLSDR LTEEDLVSAK KIVS