| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46781 |
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| Symbol | UGA1.2 |
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| ID | 4839380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1045712 |
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| End bp | 1047124 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640390695 |
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| Product | 4-aminobutyrate aminotransferase (GABA transaminase) |
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| Protein accession | XP_001384873 |
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| Protein GI | 126136699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00699] 4-aminobutyrate aminotransferase, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATCT CGTCGCTCTA CTTCCCTACT GAGCCAGCTG CACCACAAGT AGTGTCCAGT
TCTCCTGGCC CCAAGTCTCA GGCAGCCATC ACTGCACTTG GTAATGTGTT CGATTCCAGA
GCTGCCTATT TCGTTTCTGA CTATGAAAAG TCTGTTGGTA ACTACCTCGT GGACGTAGAC
GGCAACACTT ACTTGGACGT CTACGCCCAA ATCGCTTCCA TTCCGTTGGG CTACAACAAC
CCAGCCTTGA TCGAGGCTGC GAAGTCGGAC AAGATGATCC GTGCCATAGT CGATAGACCA
GCTTTGGGTA ACTTTCCAGG CAAGGACTCG GAAGAAATCA TTGCCGAGAT CTTGAAGGTT
GCTCCAAAGG GCCAGGACAA GCTCTGGTCC GGTTTGTCCG GTGCAGATGC CAACGAATTG
GCATTCAAGG CTGTGTTCTT CTGGTACCAG TCCAAGAAGA GAGGCTACAC TACCCAATTC
ACAGCTGAAG AAAACGAATC CGTCATGAAA AACCAGGCTC CAGGTTCGCC TGACTTGGCA
ATCTTGTCGT TTGAACGTGC TTTCCATGGA AGATTGTTTG CTTCGGGTTC TACAACCTGT
TCCAAGCCAA TCCACAAGTT GGACTTGCCT TCTTTCAACT GGCCAAAAGC TGAATTTCCA
TCTTACAAGT ATCCATTGGA CCAAAACGAA ACAGAAAACG CTGCAGAAGA TGCCAGATGT
TTGTCTATTG TCGAAAATCT CTTCAACACC TGGAAAGTTC CAATTGCCGG TTTATTGGTT
GAACCAATCC AGTCGGAAGG TGGAGACAAT CACGCATCCA AGGCATTCCT CCAGGGCTTG
AGAGACATTA CCTTGAAGCA CGGAGCTCTT ATGATCGTAG ATGAAGTCCA AACTGGTGTT
GGTGCTACTG GTAAGTTGTG GGCTCACGAA CATTTTGACA TTTCTCCAGT TCCAGATCTT
GTAACTTTCT CGAAGAAGTT CCAATCTGCT GGTTACTTCT TCCACGACCC AGAACTCGTT
CCAAATTTCG CCTACCGTCA ATTTAACACC TGGTGTGGTG ATCCAGCTAG AATGATCTTG
GCTGGAGCTA TTGGCCATGA AGTCGTCAAG CATGACTTGC CAGCTGTAGC CAAGAGAGTA
GGTGACTATT TGTACAAAAA ATTGGAAGCT TTACAAACCA AGTATCCTAA ATACATCAGA
GACTTGAGAG GCAAGGACAG AGCCACCTTC ATTGCTTGGT CATTGGCTGA TGTAACTGCT
AGAAACAAGT TCTTAGCCGA CATGAAAACT GTGGGTGTCA ATATTGGAGG CTGTGCCGAA
GACTCTGTCA GATTGAGACC AACCTTGGTC TTCGAAGAAA AGCATGCTGA TATCTTAGTG
GACGCCATCG ACAAGATTTT GTCTGGATAC TAA
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| Protein sequence | MSISSLYFPT EPAAPQVVSS SPGPKSQAAI TALGNVFDSR AAYFVSDYEK SVGNYLVDVD
GNTYLDVYAQ IASIPLGYNN PALIEAAKSD KMIRAIVDRP ALGNFPGKDS EEIIAEILKV
APKGQDKLWS GLSGADANEL AFKAVFFWYQ SKKRGYTTQF TAEENESVMK NQAPGSPDLA
ILSFERAFHG RLFASGSTTC SKPIHKLDLP SFNWPKAEFP SYKYPLDQNE TENAAEDARC
LSIVENLFNT WKVPIAGLLV EPIQSEGGDN HASKAFLQGL RDITLKHGAL MIVDEVQTGV
GATGKLWAHE HFDISPVPDL VTFSKKFQSA GYFFHDPELV PNFAYRQFNT WCGDPARMIL
AGAIGHEVVK HDLPAVAKRV GDYLYKKLEA LQTKYPKYIR DLRGKDRATF IAWSLADVTA
RNKFLADMKT VGVNIGGCAE DSVRLRPTLV FEEKHADILV DAIDKILSGY
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