Gene PICST_46731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46731 
SymbolUGA3.3 
ID4839192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp32740 
End bp33978 
Gene Length1239 bp 
Protein Length412 aa 
Translation table12 
GC content41% 
IMG OID640390507 
Producttranscriptional activator, Zn-finger 
Protein accessionXP_001385028 
Protein GI150865701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCA CCTTATCTTC TCCGTTCAAC TTGTTTCTTG ACGACACTGG TATATTCTAC 
TTGAGCTACT TTGAAGAGAA CGTAGCCAAC CTTTTGTCGA TCAGCCCACA GTCATCGAAT
TACTTTCTCA AGACATTTTT CACCTTGTCC ATCACCAGCG AAGCTATTCT GAACGTTCTC
GCTGCCTGGG GGGCACTTTT TCACCCAAAT TCTGATTTGA CTTTGGTCAA TAAGTACATT
ACAAAAGCCA GAATTGTGGT TAACGAAAAC CCAACAGACA AATTTGACTT CTTCATAGCC
CTAGCATACT ACTTGATTAC CATCGGAATC CAGGTATGCG CGGGAGACAC CAGAAACTGG
CATCAGCTAT TCCGCAGATG TGAAGACTTG ATGCGCAATT ATGGTGGATT CCTCAAGTTC
ATCAAGGATT TTAACTATTC CAACGACTGT AAGTTCATGA TTGCTAACTT CCAGTTCCAT
GATATAATGT CAAGTGAAAC ACTTCTGCGA GGTACGACAT GCTCTATGAG CAACTACAAC
GATCTCTTCC GTGTGAACAA ATTATTAGAA ACAGATGGGT ACGGTGTAGA TCCTTACCAG
GGGTGTATTC AACCCATCTA TCTTCTTCTT GGAGAGATTA TGAATGTATA CGTGGAGCTC
AAAGCTGAAC GCAAGAACCT CAATGAAAAA TTGAATGTGG CCGATAATCT TGAAGTGTTT
TCTACGCTAA ATCTGTTTAG ATTGGACCAC TACAAGAAAA TAGACGAAAA ATACCATGAA
CTAACAAATA AGATCAATTG CTGCGAGCCT GTCCAGTCGC AATTGGATCA GCTTTCGTCC
GATGAAGAAC GAGAATCCCA TCTGAAACTA TTCCAGCTAT ATCGTATCAC CGGGAAAATG
TACATTGCTA TCTACATTAA GCAAACACAG CCAATGTCTG CTGAAGTTCA GAACTACCTT
GTTTCGGCAC TTTCGCTCAT TAGTGACCTT ATTAATACTA ACCTCATAAG CTCGCTCAAT
ATGTCGCTTT TGATATGTGG AATATCATGC TGCAACAAGT TTGACAGGCT CAATCTTGAT
TCAACCTTCG AGAAAGTCTA CTCTCATTAC CATGTTGGAA ATGTCAAGCG TATCTGGGAC
GTTGTCAAGG AAAGTTGGAG AAGAAACTCT ACAGGGACAG CATGCATCGA CTGGATCGAT
ATCTGCAATG ATTTTGGATG GAAGTTGTCG ATGTGCTAG
 
Protein sequence
MLVTLSSPFN LFLDDTGIFY LSYFEENVAN LLSISPQSSN YFLKTFFTLS ITSEAISNVL 
AAWGALFHPN SDLTLVNKYI TKARIVVNEN PTDKFDFFIA LAYYLITIGI QVCAGDTRNW
HQLFRRCEDL MRNYGGFLKF IKDFNYSNDC KFMIANFQFH DIMSSETLSR GTTCSMSNYN
DLFRVNKLLE TDGYGVDPYQ GCIQPIYLLL GEIMNVYVEL KAERKNLNEK LNVADNLEVF
STLNSFRLDH YKKIDEKYHE LTNKINCCEP VQSQLDQLSS DEERESHSKL FQLYRITGKM
YIAIYIKQTQ PMSAEVQNYL VSALSLISDL INTNLISSLN MSLLICGISC CNKFDRLNLD
STFEKVYSHY HVGNVKRIWD VVKESWRRNS TGTACIDWID ICNDFGWKLS MC