Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46731 |
Symbol | UGA3.3 |
ID | 4839192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 32740 |
End bp | 33978 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390507 |
Product | transcriptional activator, Zn-finger |
Protein accession | XP_001385028 |
Protein GI | 150865701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTCA CCTTATCTTC TCCGTTCAAC TTGTTTCTTG ACGACACTGG TATATTCTAC TTGAGCTACT TTGAAGAGAA CGTAGCCAAC CTTTTGTCGA TCAGCCCACA GTCATCGAAT TACTTTCTCA AGACATTTTT CACCTTGTCC ATCACCAGCG AAGCTATTCT GAACGTTCTC GCTGCCTGGG GGGCACTTTT TCACCCAAAT TCTGATTTGA CTTTGGTCAA TAAGTACATT ACAAAAGCCA GAATTGTGGT TAACGAAAAC CCAACAGACA AATTTGACTT CTTCATAGCC CTAGCATACT ACTTGATTAC CATCGGAATC CAGGTATGCG CGGGAGACAC CAGAAACTGG CATCAGCTAT TCCGCAGATG TGAAGACTTG ATGCGCAATT ATGGTGGATT CCTCAAGTTC ATCAAGGATT TTAACTATTC CAACGACTGT AAGTTCATGA TTGCTAACTT CCAGTTCCAT GATATAATGT CAAGTGAAAC ACTTCTGCGA GGTACGACAT GCTCTATGAG CAACTACAAC GATCTCTTCC GTGTGAACAA ATTATTAGAA ACAGATGGGT ACGGTGTAGA TCCTTACCAG GGGTGTATTC AACCCATCTA TCTTCTTCTT GGAGAGATTA TGAATGTATA CGTGGAGCTC AAAGCTGAAC GCAAGAACCT CAATGAAAAA TTGAATGTGG CCGATAATCT TGAAGTGTTT TCTACGCTAA ATCTGTTTAG ATTGGACCAC TACAAGAAAA TAGACGAAAA ATACCATGAA CTAACAAATA AGATCAATTG CTGCGAGCCT GTCCAGTCGC AATTGGATCA GCTTTCGTCC GATGAAGAAC GAGAATCCCA TCTGAAACTA TTCCAGCTAT ATCGTATCAC CGGGAAAATG TACATTGCTA TCTACATTAA GCAAACACAG CCAATGTCTG CTGAAGTTCA GAACTACCTT GTTTCGGCAC TTTCGCTCAT TAGTGACCTT ATTAATACTA ACCTCATAAG CTCGCTCAAT ATGTCGCTTT TGATATGTGG AATATCATGC TGCAACAAGT TTGACAGGCT CAATCTTGAT TCAACCTTCG AGAAAGTCTA CTCTCATTAC CATGTTGGAA ATGTCAAGCG TATCTGGGAC GTTGTCAAGG AAAGTTGGAG AAGAAACTCT ACAGGGACAG CATGCATCGA CTGGATCGAT ATCTGCAATG ATTTTGGATG GAAGTTGTCG ATGTGCTAG
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Protein sequence | MLVTLSSPFN LFLDDTGIFY LSYFEENVAN LLSISPQSSN YFLKTFFTLS ITSEAISNVL AAWGALFHPN SDLTLVNKYI TKARIVVNEN PTDKFDFFIA LAYYLITIGI QVCAGDTRNW HQLFRRCEDL MRNYGGFLKF IKDFNYSNDC KFMIANFQFH DIMSSETLSR GTTCSMSNYN DLFRVNKLLE TDGYGVDPYQ GCIQPIYLLL GEIMNVYVEL KAERKNLNEK LNVADNLEVF STLNSFRLDH YKKIDEKYHE LTNKINCCEP VQSQLDQLSS DEERESHSKL FQLYRITGKM YIAIYIKQTQ PMSAEVQNYL VSALSLISDL INTNLISSLN MSLLICGISC CNKFDRLNLD STFEKVYSHY HVGNVKRIWD VVKESWRRNS TGTACIDWID ICNDFGWKLS MC
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