Gene PICST_46506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46506 
Symbol 
ID4839522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1394569 
End bp1395576 
Gene Length1008 bp 
Protein Length336 aa 
Translation table12 
GC content42% 
IMG OID640390837 
Productpredicted protein 
Protein accessionXP_001384954 
Protein GI150865644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.25279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGCGATGATT TTTCCATCTG CGATGATTGC TTAGGCCCAG ATAAGCATCT CAAGATGATC 
AAGCAGAACA TGGGAGAAGA GTGCAAATCG TGCACCAGAC CGTTTACGGT ACTCCGATGG
AACAATTCGG TTTCAGTCAA CAAGTCCAAG AAGACCATAA TATGTTATAC TTGCGCACGA
GCTAAGAACT GCTGTCAATC GTGTATGCTC GATGTGAATT ATAGAATACC CATTGATATA
CGAGATACGG CTTTGAAGAT GGCTGGCTTG GAAAACCCAG CTCAGCTTCT AGGGGCCAGT
AGTAGTACGA CCAATAGAGA AGTCAAGGCG ATAATAGCAG ACAAACAGGA TCAAATATTT
AAACAAAAGG ACGAACTCGA TTCTGGAGAT GTTGATAGAA GAAACGAAGC CAGAGAAATC
CTCATGAAAT TGTCACAACG ACTCAACGAC AATAGCAAAC TAACAAAGAC AAAATCCCTA
AAGTCCGACA AGGCAGAAGA AGAAAAATTG AACAAGACGG ATGTGAGTAA AATTGTGGCA
AAGTTACCCT TTGGAGGGCT GTTGGACGTA GAAAAACATC CTGAAGTTGC TTCATTTTTT
TTGTTTGGGA TTAGTTCCGA TTTGCCTCAG TATGCCATTA GCGAATTTTT CGGCAGTTTC
GGTAAGATCA AGACCATTCA GATTGTCCAT AGAGCCAAAT GTGGGTACGT GGCATTAAGT
AGCAGAAAGA CTGCCGAAGA AGCAGCCAAG TCAATCGTCT CTAATGGACT CAACGAGAAC
AGAGCCACTG CTGGTCTAGT GATTCTACTT GAAAAATATC CCATGAGAGT CTGCTGGGGC
AAGCCCAAGT CGCTAGGAGT GACTAATGAT GAACACTACA AGATCAGTTT GGTGGTAAAC
AAGGTAATGC GACAGTTAGC CGAGAAAGAC ACTGCTTTTC TGACAAAGAA TAATAAGACT
ATAAGTCTGG CTAAGACTGA AAAGAATACT ACAGCCACCA ATAAGAAC
 
Protein sequence
SDDFSICDDC LGPDKHLKMI KQNMGEECKS CTRPFTVLRW NNSVSVNKSK KTIICYTCAR 
AKNCCQSCML DVNYRIPIDI RDTALKMAGL ENPAQLLGAS SSTTNREVKA IIADKQDQIF
KQKDELDSGD VDRRNEAREI LMKLSQRLND NSKLTKTKSL KSDKAEEEKL NKTDVSKIVA
KLPFGGSLDV EKHPEVASFF LFGISSDLPQ YAISEFFGSF GKIKTIQIVH RAKCGYVALS
SRKTAEEAAK SIVSNGLNEN RATAGLVILL EKYPMRVCWG KPKSLGVTND EHYKISLVVN
KVMRQLAEKD TAFSTKNNKT ISSAKTEKNT TATNKN