Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46506 |
Symbol | |
ID | 4839522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1394569 |
End bp | 1395576 |
Gene Length | 1008 bp |
Protein Length | 336 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390837 |
Product | predicted protein |
Protein accession | XP_001384954 |
Protein GI | 150865644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.25279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGCGATGATT TTTCCATCTG CGATGATTGC TTAGGCCCAG ATAAGCATCT CAAGATGATC AAGCAGAACA TGGGAGAAGA GTGCAAATCG TGCACCAGAC CGTTTACGGT ACTCCGATGG AACAATTCGG TTTCAGTCAA CAAGTCCAAG AAGACCATAA TATGTTATAC TTGCGCACGA GCTAAGAACT GCTGTCAATC GTGTATGCTC GATGTGAATT ATAGAATACC CATTGATATA CGAGATACGG CTTTGAAGAT GGCTGGCTTG GAAAACCCAG CTCAGCTTCT AGGGGCCAGT AGTAGTACGA CCAATAGAGA AGTCAAGGCG ATAATAGCAG ACAAACAGGA TCAAATATTT AAACAAAAGG ACGAACTCGA TTCTGGAGAT GTTGATAGAA GAAACGAAGC CAGAGAAATC CTCATGAAAT TGTCACAACG ACTCAACGAC AATAGCAAAC TAACAAAGAC AAAATCCCTA AAGTCCGACA AGGCAGAAGA AGAAAAATTG AACAAGACGG ATGTGAGTAA AATTGTGGCA AAGTTACCCT TTGGAGGGCT GTTGGACGTA GAAAAACATC CTGAAGTTGC TTCATTTTTT TTGTTTGGGA TTAGTTCCGA TTTGCCTCAG TATGCCATTA GCGAATTTTT CGGCAGTTTC GGTAAGATCA AGACCATTCA GATTGTCCAT AGAGCCAAAT GTGGGTACGT GGCATTAAGT AGCAGAAAGA CTGCCGAAGA AGCAGCCAAG TCAATCGTCT CTAATGGACT CAACGAGAAC AGAGCCACTG CTGGTCTAGT GATTCTACTT GAAAAATATC CCATGAGAGT CTGCTGGGGC AAGCCCAAGT CGCTAGGAGT GACTAATGAT GAACACTACA AGATCAGTTT GGTGGTAAAC AAGGTAATGC GACAGTTAGC CGAGAAAGAC ACTGCTTTTC TGACAAAGAA TAATAAGACT ATAAGTCTGG CTAAGACTGA AAAGAATACT ACAGCCACCA ATAAGAAC
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Protein sequence | SDDFSICDDC LGPDKHLKMI KQNMGEECKS CTRPFTVLRW NNSVSVNKSK KTIICYTCAR AKNCCQSCML DVNYRIPIDI RDTALKMAGL ENPAQLLGAS SSTTNREVKA IIADKQDQIF KQKDELDSGD VDRRNEAREI LMKLSQRLND NSKLTKTKSL KSDKAEEEKL NKTDVSKIVA KLPFGGSLDV EKHPEVASFF LFGISSDLPQ YAISEFFGSF GKIKTIQIVH RAKCGYVALS SRKTAEEAAK SIVSNGLNEN RATAGLVILL EKYPMRVCWG KPKSLGVTND EHYKISLVVN KVMRQLAEKD TAFSTKNNKT ISSAKTEKNT TATNKN
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