| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46425 |
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| Symbol | TML1 |
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| ID | 4839703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 896761 |
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| End bp | 897963 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391018 |
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| Product | Trimethyllysine dioxygenase (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha-ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD) |
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| Protein accession | XP_001384841 |
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| Protein GI | 126136635 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | [TIGR02410] trimethyllysine dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTC CCTCAATCAC TTCAGCTACT GCCATCTCGC CAGACTCTGT CGAGATCAAA
TGGTCCAACG ACCAATCCTC CGTCTTCCAC AATATTTGGT TGAGAGACAA TTGTCACTGT
GAAAAGTGCT ACTACCCTGC AACCAAACAG AGATTGTTGA ACTCTGCTAC AATTAACGCC
GATATAGGAG CACGTCATAT CGAAGTCAAG TTCCCCGTTC TTGAAATTGT GTGGAACCAG
GAAGACCACA AGTCGTCGTA TTCCTTTTCT TGGCTCTACC TTCACTCGTA CCAGCCTAGG
TTGGTACCCG TCGACGAAAA GCTCGCAGGA GAAAAGACTA TTTTAGCCCA AAAGTTGTGG
AAGGTTGCTG ATATCAAGGA TTCGTTGCCA GCTGTCGATT TCAACAAGAT CATCGACTCA
GACGAAGGCT CCGACAACGA AGATGCTATT CGCGATTGGA CGCTAAAAAT CTGGAAGCAC
GGTTTCTGTT TCATCGACAA CGTTCCAGTA ACTCCAGAGG ACACAGAGAA GCTCTGTGAG
AAGCTCTGTT ACATCAGACC AACACATTAC GGTGGTTTCT GGGACTTCAC GAGTGATCTC
TCAAAAGCAG ACACTGCATA TACAAACATC GACATTTCAT CTCATACAGA TGGAACCTAT
TGGTCCGACA CCCCAGGATT GCAATTGTTC CACTTATTGT ACCACGATGG AACAGGAGGA
ACGACTTCGC TTGTAGATGC ATTTCAATGT GCAAAGGTCT TGAAGAAGAA CCATCCGGAA
AGTTTTGAAC TATTAACTAG AATTCCCATT CCAGCTCATT CCGCGGGCGA GGAAAAAGTC
TGTATCCAGC CTGATATTCC TCAGCCTATC TTTAAGTTGG ACAATGAGGG CGAGTTGATC
CAGGTTCGTT GGAACCAGAG CGACCGCTCG ACCATGGACA ATTGGACTAA CCCAGCTGAC
ATACCCAAAT TCTATGCTGC TATCAGACAT TGGGTGCAAA TCATTACTGA TCCCGAAAAC
GAAATCTTCT ACCAGTTGAA GCCTGGTCAG TGTTTGATAT TTGACAACTG GAGATGTTTC
CACTCCAGAA CAGAGTTCAC GGGCAAGAGA AGAATGTGTG GTGCCTACAT CAACAGAGAC
GACTTTGTCT CTAAATTAAA GTTGCTCAAC TTGGGCAGAC CAGCTGTATT GGAGTCTATT
TGA
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| Protein sequence | MTSPSITSAT AISPDSVEIK WSNDQSSVFH NIWLRDNCHC EKCYYPATKQ RLLNSATINA
DIGARHIEVK FPVLEIVWNQ EDHKSSYSFS WLYLHSYQPR LVPVDEKLAG EKTILAQKLW
KVADIKDSLP AVDFNKIIDS DEGSDNEDAI RDWTLKIWKH GFCFIDNVPV TPEDTEKLCE
KLCYIRPTHY GGFWDFTSDL SKADTAYTNI DISSHTDGTY WSDTPGLQLF HLLYHDGTGG
TTSLVDAFQC AKVLKKNHPE SFELLTRIPI PAHSAGEEKV CIQPDIPQPI FKLDNEGELI
QVRWNQSDRS TMDNWTNPAD IPKFYAAIRH WVQIITDPEN EIFYQLKPGQ CLIFDNWRCF
HSRTEFTGKR RMCGAYINRD DFVSKLKLLN LGRPAVLESI
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