Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46342 |
Symbol | |
ID | 4839437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1332860 |
End bp | 1334794 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390752 |
Product | predicted protein |
Protein accession | XP_001385260 |
Protein GI | 150865871 |
COG category | [Z] Cytoskeleton |
COG ID | [COG5059] Kinesin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0862939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0194162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGACCTCCTT CCAGATCCTT CAGACCCAGT TCTCCACAAG TAGTTCCCGG CTCCAGATCA GGCTCTTCCT TGGGCAGTAG ACCAGGAACT CCATCGTTTA TAAAAAATCA GGAACCTTAC ACGGGCACCA TATCTGTGTC TATCAGACCA AATCCTCATA GTGTTAATTC CTCTCAACCC AGTGCCTGGG AGGTGGACCA TTTTTCTAAC ACCATCACTA ATACTTCAGA CTATACCTCG TTCACTTTTG ATAACGTGTT CTCACCAGAC ACTGCTCTCA CAAACAGAGA AGTATATACG AGATCATGTT CCAATATAGT CAGCCAATTC TTGAACCAGG GCTATAATGG TACAGTATTT GCCTATGGTA TGACAGGTTC AGGGAAAACA TTTTCAATGA AGGGAGAGGT TGGCGACCCT GGTTTTGTAG AGTTGGCCGT AGAAGATATA TACCGAAAGA TCGACATGGA CAGTCTTGCT AAAGAATACA CTATCAGCAT CAACTATCTT GAAATCTACA ATGAGAAAAT CATCGATCTA TTGCTGGCAA GTTCAACAGC AACTATGGAT TTGAAGATCC GCGACGACCC TATTCACGGA ACTAAAATAG TAGGAATAAC CACACCTGTC ATTTCATCTA AAGAACAGTT ATTGCTGTTG ATAAAGAAAG GAGATATCAA CAGAAAAACA AGTGCTACAG ATTTCAATGC AAGATCCTCA AGATCGCACT CCATTCTTCA GATCAGATTG GCCACTATTG ACCTCAACAA TAGAACGGAA CAGCATTCCA CCTTGTCTTT GTGTGACTTA GCAGGTTCAG AAAGAGCTAC TTCCAGTGTA GAAAGAAGAA AAGAAGGTGC TTTCATCAAC AAGTCGTTAT TGGCTCTTTC CACCGTAATC AACAAGTTAT CTTCGGCATC TTCTGGCAAC GGACCAACTG GTGCAGACCA TATTCCATAT CGTGATTCCA AGTTAACAAG ATTGCTCCAG CCAGCTTTGT CTGGATCTTC GTTGGTGCTG ATTTTATGCA CAATTCATTT GGGCTCTGGT GTCAGCCAGA CTCTGTGTGT CTCAGAGACT TACAACACGT TGCGGTTTGC TGCTCGTGCC AAAGACATCA TCATGAATGT TGAACGTAAC TCAACTTCTT CCTTCAGTGG AGCAGACTCT ATGCTTCTTA TAGAGGAATT AAGAAAGACG ATAGAGTCGC AAAAGAATGA GATTTCAATC TTAAAGCTCA ATGGTAATAT CGCAGGTCTG GGACATGGCT CTATCTCTGG CAATGAGTCA ATGAAAGTTG CACAACTAGA GGCAGACAAC AGAGTATTGA AGGAAAAGAT AGAGCATCTC ACACGACTTA CAGACTTGCA AAAGACTGAA ACTGTGATCT TGAAAAACGA TGCTCTTAAC GATATATTAG CTGGAGGAGG TTCGCTGCAC ACAATGATGG CTAACCTCGA AGATTTCCAC AAGAGAGTCA ACTATGAAAT GGAAGAATAC AAGTCGTATA TATACCATCT TGAAAACCAG GTACGTCTTG CACATCAACA GAATATTGTT GACAACAAAC CAAGTTCGTC ATCTGCTATG GAGGGAATTA CTACTGATGC GGATCTTGAA GCTGTATTGA AAGACCAGGA AGATGAAATT CTACAATTGA AAGAACTCTT GAAAGACAAG GATCACATTA TCCAGACTCT TACCAAGACT TCTAAGGTTC GTAGACTTGG AATGTCCAAT TCTGCCAATT CCATGCAACA CAGCAACCCA TCTGGCAAAC CGATTGTATC AGGTTTCAGA AATGACAACC CAAGTTCTCC CACTAGAGGA AACAAGGAAA ATGAGCCTTA TTTGAAAGAC TTTAATATCA GCCCTAAGAA ACCAAAGGAA AGTATAGACA TTTCCGAAAC TGCTGGTATC AAATTCGTTA TATAA
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Protein sequence | RPPSRSFRPS SPQVVPGSRS GSSLGSRPGT PSFIKNQEPY TGTISVSIRP NPHSVNSSQP SAWEVDHFSN TITNTSDYTS FTFDNVFSPD TALTNREVYT RSCSNIVSQF LNQGYNGTVF AYGMTGSGKT FSMKGEVGDP GFVELAVEDI YRKIDMDSLA KEYTISINYL EIYNEKIIDL LSASSTATMD LKIRDDPIHG TKIVGITTPV ISSKEQLLSL IKKGDINRKT SATDFNARSS RSHSILQIRL ATIDLNNRTE QHSTLSLCDL AGSERATSSV ERRKEGAFIN KSLLALSTVI NKLSSASSGN GPTGADHIPY RDSKLTRLLQ PALSGSSLVS ILCTIHLGSG VSQTSCVSET YNTLRFAARA KDIIMNVERN STSSFSGADS MLLIEELRKT IESQKNEISI LKLNGNIAGS GHGSISGNES MKVAQLEADN RVLKEKIEHL TRLTDLQKTE TVILKNDALN DILAGGGSSH TMMANLEDFH KRVNYEMEEY KSYIYHLENQ VRLAHQQNIV DNKPSSSSAM EGITTDADLE AVLKDQEDEI LQLKELLKDK DHIIQTLTKT SKVRRLGMSN SANSMQHSNP SGKPIVSGFR NDNPSSPTRG NKENEPYLKD FNISPKKPKE SIDISETAGI KFVI
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