Gene PICST_46342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46342 
Symbol 
ID4839437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1332860 
End bp1334794 
Gene Length1935 bp 
Protein Length644 aa 
Translation table12 
GC content41% 
IMG OID640390752 
Productpredicted protein 
Protein accessionXP_001385260 
Protein GI150865871 
COG category[Z] Cytoskeleton 
COG ID[COG5059] Kinesin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0862939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0194162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGACCTCCTT CCAGATCCTT CAGACCCAGT TCTCCACAAG TAGTTCCCGG CTCCAGATCA 
GGCTCTTCCT TGGGCAGTAG ACCAGGAACT CCATCGTTTA TAAAAAATCA GGAACCTTAC
ACGGGCACCA TATCTGTGTC TATCAGACCA AATCCTCATA GTGTTAATTC CTCTCAACCC
AGTGCCTGGG AGGTGGACCA TTTTTCTAAC ACCATCACTA ATACTTCAGA CTATACCTCG
TTCACTTTTG ATAACGTGTT CTCACCAGAC ACTGCTCTCA CAAACAGAGA AGTATATACG
AGATCATGTT CCAATATAGT CAGCCAATTC TTGAACCAGG GCTATAATGG TACAGTATTT
GCCTATGGTA TGACAGGTTC AGGGAAAACA TTTTCAATGA AGGGAGAGGT TGGCGACCCT
GGTTTTGTAG AGTTGGCCGT AGAAGATATA TACCGAAAGA TCGACATGGA CAGTCTTGCT
AAAGAATACA CTATCAGCAT CAACTATCTT GAAATCTACA ATGAGAAAAT CATCGATCTA
TTGCTGGCAA GTTCAACAGC AACTATGGAT TTGAAGATCC GCGACGACCC TATTCACGGA
ACTAAAATAG TAGGAATAAC CACACCTGTC ATTTCATCTA AAGAACAGTT ATTGCTGTTG
ATAAAGAAAG GAGATATCAA CAGAAAAACA AGTGCTACAG ATTTCAATGC AAGATCCTCA
AGATCGCACT CCATTCTTCA GATCAGATTG GCCACTATTG ACCTCAACAA TAGAACGGAA
CAGCATTCCA CCTTGTCTTT GTGTGACTTA GCAGGTTCAG AAAGAGCTAC TTCCAGTGTA
GAAAGAAGAA AAGAAGGTGC TTTCATCAAC AAGTCGTTAT TGGCTCTTTC CACCGTAATC
AACAAGTTAT CTTCGGCATC TTCTGGCAAC GGACCAACTG GTGCAGACCA TATTCCATAT
CGTGATTCCA AGTTAACAAG ATTGCTCCAG CCAGCTTTGT CTGGATCTTC GTTGGTGCTG
ATTTTATGCA CAATTCATTT GGGCTCTGGT GTCAGCCAGA CTCTGTGTGT CTCAGAGACT
TACAACACGT TGCGGTTTGC TGCTCGTGCC AAAGACATCA TCATGAATGT TGAACGTAAC
TCAACTTCTT CCTTCAGTGG AGCAGACTCT ATGCTTCTTA TAGAGGAATT AAGAAAGACG
ATAGAGTCGC AAAAGAATGA GATTTCAATC TTAAAGCTCA ATGGTAATAT CGCAGGTCTG
GGACATGGCT CTATCTCTGG CAATGAGTCA ATGAAAGTTG CACAACTAGA GGCAGACAAC
AGAGTATTGA AGGAAAAGAT AGAGCATCTC ACACGACTTA CAGACTTGCA AAAGACTGAA
ACTGTGATCT TGAAAAACGA TGCTCTTAAC GATATATTAG CTGGAGGAGG TTCGCTGCAC
ACAATGATGG CTAACCTCGA AGATTTCCAC AAGAGAGTCA ACTATGAAAT GGAAGAATAC
AAGTCGTATA TATACCATCT TGAAAACCAG GTACGTCTTG CACATCAACA GAATATTGTT
GACAACAAAC CAAGTTCGTC ATCTGCTATG GAGGGAATTA CTACTGATGC GGATCTTGAA
GCTGTATTGA AAGACCAGGA AGATGAAATT CTACAATTGA AAGAACTCTT GAAAGACAAG
GATCACATTA TCCAGACTCT TACCAAGACT TCTAAGGTTC GTAGACTTGG AATGTCCAAT
TCTGCCAATT CCATGCAACA CAGCAACCCA TCTGGCAAAC CGATTGTATC AGGTTTCAGA
AATGACAACC CAAGTTCTCC CACTAGAGGA AACAAGGAAA ATGAGCCTTA TTTGAAAGAC
TTTAATATCA GCCCTAAGAA ACCAAAGGAA AGTATAGACA TTTCCGAAAC TGCTGGTATC
AAATTCGTTA TATAA
 
Protein sequence
RPPSRSFRPS SPQVVPGSRS GSSLGSRPGT PSFIKNQEPY TGTISVSIRP NPHSVNSSQP 
SAWEVDHFSN TITNTSDYTS FTFDNVFSPD TALTNREVYT RSCSNIVSQF LNQGYNGTVF
AYGMTGSGKT FSMKGEVGDP GFVELAVEDI YRKIDMDSLA KEYTISINYL EIYNEKIIDL
LSASSTATMD LKIRDDPIHG TKIVGITTPV ISSKEQLLSL IKKGDINRKT SATDFNARSS
RSHSILQIRL ATIDLNNRTE QHSTLSLCDL AGSERATSSV ERRKEGAFIN KSLLALSTVI
NKLSSASSGN GPTGADHIPY RDSKLTRLLQ PALSGSSLVS ILCTIHLGSG VSQTSCVSET
YNTLRFAARA KDIIMNVERN STSSFSGADS MLLIEELRKT IESQKNEISI LKLNGNIAGS
GHGSISGNES MKVAQLEADN RVLKEKIEHL TRLTDLQKTE TVILKNDALN DILAGGGSSH
TMMANLEDFH KRVNYEMEEY KSYIYHLENQ VRLAHQQNIV DNKPSSSSAM EGITTDADLE
AVLKDQEDEI LQLKELLKDK DHIIQTLTKT SKVRRLGMSN SANSMQHSNP SGKPIVSGFR
NDNPSSPTRG NKENEPYLKD FNISPKKPKE SIDISETAGI KFVI