| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46234 |
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| Symbol | |
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| ID | 4839491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 229269 |
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| End bp | 229949 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390806 |
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| Product | predicted protein |
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| Protein accession | XP_001385061 |
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| Protein GI | 126137075 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.490385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCTT TTGTACTCGG TTCTACGGGT CTTGTAGGCC TTCAAATTCT CAAGGTTCTT
GACAGTTCAA CTGCCTTCAA AAAGGTCTCT ACTGTTAGTC GTCGTCTTCC AAGTGTCACT
AGTGGCAAAA TCAACTCAAT CGAAAAGAAG GAGAGTGAAG AATGGCCAGC CATCATTGAA
AAGGAAGCCA AGGACTACTC AGCCTTTTTC TCGGCCTTTG GAACTACTCG TGCTGCTGCT
GGATCTGCTG ATAACTTCAA AAAAATCGAT TATGGAATCA ACTACGAGGC TGCAAAGGCG
GCTAAGGCTG CGGGGGTTGA AACTTTCGTA TTGGTTTCCA CCATAGGCGC CAATGCCCAG
TCTTCGTTTT TGTACCTCCA GGTAAAGGGC CAATTGGAAG AGGACATCAT AGCTTTGAAG
TTTCCCAGAA CCATCATCTT GAGACCAGGG ATCCTTTTGG GCGAAAGGGA AACTTCTAAA
GGTTTGCTTA ACAACTTATC TGTTGGTGTA TTGAAGTATC TTCATGGTAC CCCTCTAACT
TTCCTTGGTA ACCCAATCTT TGGCGCAGAA GTCGCCCAGA TTGCTGTGAA TGCTGCTCAG
GAGAGCTTTG AGAAGGGCGA CGAACCGGTG GTTAAGTTTT ATGAAGCTAG AGAGCTTACT
GAGTTGTACA AGAAATTGTG A
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| Protein sequence | MSAFVLGSTG LVGLQILKVL DSSTAFKKVS TVSRRLPSVT SGKINSIEKK ESEEWPAIIE
KEAKDYSAFF SAFGTTRAAA GSADNFKKID YGINYEAAKA AKAAGVETFV LVSTIGANAQ
SSFLYLQVKG QLEEDIIALK FPRTIILRPG ILLGERETSK GLLNNLSVGV LKYLHGTPLT
FLGNPIFGAE VAQIAVNAAQ ESFEKGDEPV VKFYEARELT ELYKKL
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