Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46211 |
Symbol | |
ID | 4839445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1362608 |
End bp | 1363162 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390760 |
Product | predicted protein |
Protein accession | XP_001384949 |
Protein GI | 150865640 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.223556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000159412 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGAAA TCGCAATTGC TAGTAGTAAT AGCTTCGATC TGGCCAAGTA CGTGCTGGAA TCGGCTTCTG TCACCAAGGA GCCTGTCCTC TTCCACATTT TGCATATCAT AAACATCTCC AAATCACGTC TTAGCCAGAG GGACGACTGG CTCGAGTACA GCGATCCCAA TAGCGCGTCT GTAGACAGAT TGAACAAGCT GAAGAAAATG GTGCGAGAGG TTAATATCGA CGACGATGGC CCTATAGTGA GTGCATTTGA CGTGTACAAG TTGCTACTAC AAGATTCACA CAAGAACGTA TGCTATGCAT TCGAAAAAGA ACCGCTAAGA TTCTTGCGAG ATCAACGGCA GTCGACAGGC ACACCACTTC CAATCCGTCT TGGGGGAAAA TTACTTGTGA AAAAAGATAC GCCCGTCTGG AACGGGGTTC TTTTTCTTGA GAATAGGCAA TGTACGTACC TAGGAGTGGA TGCAAACGAT CCGTTGAATG CTCAGCTCAA CACTGGATTG GTAGAAAAGT ATATAGCCAT TTTAGACCAA GAGCTTAAGA GTTAA
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Protein sequence | MSEIAIASSN SFDSAKYVSE SASVTKEPVL FHILHIINIS KSRLSQRDDW LEYSDPNSAS VDRLNKSKKM VREVNIDDDG PIVSAFDVYK LLLQDSHKNV CYAFEKEPLR FLRDQRQSTG TPLPIRLGGK LLVKKDTPVW NGVLFLENRQ CTYLGVDAND PLNAQLNTGL VEKYIAILDQ ELKS
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