Gene PICST_46142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46142 
Symbol 
ID4839648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1299768 
End bp1300247 
Gene Length480 bp 
Protein Length159 aa 
Translation table12 
GC content42% 
IMG OID640390963 
Productpredicted protein 
Protein accessionXP_001385253 
Protein GI150865865 
COG category[R] General function prediction only 
COG ID[COG1019] Predicted nucleotidyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.336823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAATTCAACG TTGCAGCCGT AGGAGGAACA TTTGATCACA TTCACGATGG CCACAAGATT 
CTTTTGTCTG TAGCACTTTT CTTAGCTGGT AAGAAACTCA TTGTTGGAGT AACTGGGGCT
GCCATGCTTG TAAAGAAGAA GTTTGCTGAA GTTCTTGAAA GTTATTCTGT AAGACAGCAA
AGTGTAGTCA GCTTCCTCAC GCTTGTATCT ATCGACGACT CCGTTCTGTA TGAGATATAC
GAGATCAATG ATATCTGTGG TCCTACTGGA TTTGTCCGCG ATATCGACGC CTTGGTAGTA
AGCTATGAGT CAATCAAAGG AGGCGAGTTT GTAAATAACT ATAGGAAAGA AAGGGGATTC
CTGACACTTG ACGTTAGTGT CATCAAAGTG ATTGGAGAAG ACGAAGTCTC TAGCGACAAT
AACTGGGCTG GAAAGCTAAG TTCAACTGAT ATCAGAGAGA AGGAGTCAAA ATTACTATAG
 
Protein sequence
QFNVAAVGGT FDHIHDGHKI LLSVALFLAG KKLIVGVTGA AMLVKKKFAE VLESYSVRQQ 
SVVSFLTLVS IDDSVSYEIY EINDICGPTG FVRDIDALVV SYESIKGGEF VNNYRKERGF
STLDVSVIKV IGEDEVSSDN NWAGKLSSTD IREKESKLL